ID A0A210PH28_MIZYE Unreviewed; 1464 AA.
AC A0A210PH28;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=ATP-dependent RNA helicase TDRD9 {ECO:0000313|EMBL:OWF35726.1};
GN ORFNames=KP79_PYT10770 {ECO:0000313|EMBL:OWF35726.1};
OS Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
OC Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae;
OC Mizuhopecten.
OX NCBI_TaxID=6573 {ECO:0000313|EMBL:OWF35726.1, ECO:0000313|Proteomes:UP000242188};
RN [1] {ECO:0000313|Proteomes:UP000242188}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PY_sf001 {ECO:0000313|Proteomes:UP000242188};
RX PubMed=28812685; DOI=10.1038/s41559-017-0120;
RA Wang S., Zhang J., Jiao W., Li J., Xun X., Sun Y., Guo X., Huan P.,
RA Dong B., Zhang L., Hu X., Sun X., Wang J., Zhao C., Wang Y., Wang D.,
RA Huang X., Wang R., Lv J., Li Y., Zhang Z., Liu B., Lu W., Hui Y., Liang J.,
RA Zhou Z., Hou R., Li X., Liu Y., Li H., Ning X., Lin Y., Zhao L., Xing Q.,
RA Dou J., Li Y., Mao J., Guo H., Dou H., Li T., Mu C., Jiang W., Fu Q.,
RA Fu X., Miao Y., Liu J., Yu Q., Li R., Liao H., Li X., Kong Y., Jiang Z.,
RA Chourrout D., Li R., Bao Z.;
RT "Scallop genome provides insights into evolution of bilaterian karyotype
RT and development.";
RL Nat. Ecol. Evol. 1:120-120(2017).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DEAH subfamily.
CC {ECO:0000256|ARBA:ARBA00008792}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWF35726.1}.
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DR EMBL; NEDP02076711; OWF35726.1; -; Genomic_DNA.
DR STRING; 6573.A0A210PH28; -.
DR Proteomes; UP000242188; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0031047; P:regulatory ncRNA-mediated gene silencing; IEA:UniProtKB-KW.
DR GO; GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 2.30.30.140; -; 1.
DR Gene3D; 2.40.50.90; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR035437; SNase_OB-fold_sf.
DR InterPro; IPR002999; Tudor.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF113; ATP-DEPENDENT RNA HELICASE TDRD9; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00567; TUDOR; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00333; TUDOR; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF63748; Tudor/PWWP/MBT; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS50304; TUDOR; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Developmental protein {ECO:0000256|ARBA:ARBA00022473};
KW Differentiation {ECO:0000256|ARBA:ARBA00022782};
KW Helicase {ECO:0000313|EMBL:OWF35726.1};
KW Hydrolase {ECO:0000313|EMBL:OWF35726.1};
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000242188};
KW RNA-mediated gene silencing {ECO:0000256|ARBA:ARBA00023158};
KW Spermatogenesis {ECO:0000256|ARBA:ARBA00022871}.
FT DOMAIN 153..319
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 367..549
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 948..1017
FT /note="Tudor"
FT /evidence="ECO:0000259|PROSITE:PS50304"
SQ SEQUENCE 1464 AA; 166191 MW; A2C5D52569E91AC8 CRC64;
MNRLVSEISL DAADEWFKIG KKAYKDVHTF SKSKTGGSSD FDLVTQKPRV VNEETYIPSY
LRGARDETQR DYATSYLQEE ENHLFETTQP QQHGVHDATE RMSEIDIDSI CTSAVAMPDD
LIPSNAVDVY LNYKFQHSYD VKMPITRHHQ QVVSTIECNQ VTVVQGSTGS GKTTQVPQYI
LDHYAAMNKY CNIIVTQPRR IAAISIARRV CSERDWQLGT VCGYQVGMDK QTSEDTRLTY
VTTGVLLQKL INTKNMLQFT HVILDEVHER DQDTDFSLLV VRKLLRTNSP HVKVVLMSAT
IESEMFASYF ALPLGRKLEP APVISVEGKI FAVSEYYTED LSVLGEVPPL DEGSPAISQE
AYSMAVRLIQ EFDSLEAKDQ GISPTGFANF RGTVLVFLPG QAEIEFMDTS LQERCQKHNL
RILPLHSSIT LEEQSKVFEM PGTGERKIIL STNIAESSIT VPDIKYVIDF CLTKNLVADA
ETNYTSLQTE WASRANCNQR KGRSGRVSNG RVYRMITRYF WEHFIQDFGI PEMQRCPLER
VILHVKVLDL GEPKAILALA LSPPNLDDIE KTILLLKEVG ALSTPTHEAG CRHDGDLTFV
GRVLADVPVD VRLGKLLILG HVFGLLEDCL IIAAALSLKS VFASPYKKHL EAYRHKLEWA
AGSSSDCIAI LNAYREWEKR KMLGDFKRRS QKEVSWGRMH FLQIKRLYEV QELVKELESR
LSSLNIQKPR QTPNYKRRFS EDQERLLLKV VMAGAFYPNF FIKEPIDEQE SNRIMSGHDP
FNTVMVKGLP ANQGSLYKSA VEDHFRDVGY RPSAFFEETK YLIVLLSSRN WQRSHKRAVY
VQIGMSCYTQ IHHVTHLYQV KQVSMLHTGT PCHTSISSQT GKQVTHRYFM SNSDETVILK
ILLFLVFSQV KECGHFWAQY SERENYNALV RIHTCLNQGR SLMPLVGRIM VGKLCAAPFE
DEAREYYRAR VDGIIRTQLP RTNQFRESLE VFFVDYGNMA VVAREDVREL PEPISEVPFQ
CVDCYLSGVR PSVVKCPDGR WTEQANNTFR SMVMNKELFG KVYSVVRGVV RMELIEVLRN
GRQICFNHEL ISLEFADAAE ESFLSKQNHD QRVLEETTGQ LGQTGPQGQS NKQQTSWLNL
ALKPSTSMTF GESRRGGKVN LRGPNNPYEM AFTSMTNAGS CRCAKIEPGS INCVAIDDEP
HDPHSRLMIA AFVGLNPGGS TMMARDTTVM PLIPGLPSII SLLFAPITEF RTDPGLTRLT
GAICGLGPAL TMEYSCFPDH DIEVIFDTKI DLEDIYKING VRMAINIAIG SQEKVMGWGP
DAVYKIQDSA RTKVMEVLQK RRETVQPRSA ERPYKWNQLK PEDILHHRLE NTDADNPVLL
NLHSAVALID EEVDQIRLNS SAHHKERLKQ HVKFLKKAAK DLYRRDPITC ELCNMTANTP
QLLASHLDMR KHREREEALE DDED
//
