ID A0A210QCJ6_MIZYE Unreviewed; 2673 AA.
AC A0A210QCJ6;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Nucleosome-remodeling factor subunit NURF301 {ECO:0000313|EMBL:OWF46473.1};
GN ORFNames=KP79_PYT05219 {ECO:0000313|EMBL:OWF46473.1};
OS Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
OC Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae;
OC Mizuhopecten.
OX NCBI_TaxID=6573 {ECO:0000313|EMBL:OWF46473.1, ECO:0000313|Proteomes:UP000242188};
RN [1] {ECO:0000313|Proteomes:UP000242188}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PY_sf001 {ECO:0000313|Proteomes:UP000242188};
RX PubMed=28812685; DOI=10.1038/s41559-017-0120;
RA Wang S., Zhang J., Jiao W., Li J., Xun X., Sun Y., Guo X., Huan P.,
RA Dong B., Zhang L., Hu X., Sun X., Wang J., Zhao C., Wang Y., Wang D.,
RA Huang X., Wang R., Lv J., Li Y., Zhang Z., Liu B., Lu W., Hui Y., Liang J.,
RA Zhou Z., Hou R., Li X., Liu Y., Li H., Ning X., Lin Y., Zhao L., Xing Q.,
RA Dou J., Li Y., Mao J., Guo H., Dou H., Li T., Mu C., Jiang W., Fu Q.,
RA Fu X., Miao Y., Liu J., Yu Q., Li R., Liao H., Li X., Kong Y., Jiang Z.,
RA Chourrout D., Li R., Bao Z.;
RT "Scallop genome provides insights into evolution of bilaterian karyotype
RT and development.";
RL Nat. Ecol. Evol. 1:120-120(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWF46473.1}.
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DR EMBL; NEDP02004182; OWF46473.1; -; Genomic_DNA.
DR STRING; 6573.A0A210QCJ6; -.
DR EnsemblMetazoa; XM_021505987.1; XP_021361662.1; LOC110455698.
DR Proteomes; UP000242188; Unassembled WGS sequence.
DR GO; GO:0016589; C:NURF complex; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd05509; Bromo_gcn5_like; 1.
DR CDD; cd15559; PHD1_BPTF; 1.
DR CDD; cd15560; PHD2_3_BPTF; 2.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 3.
DR InterPro; IPR038028; BPTF.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR018359; Bromodomain_CS.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR028941; WHIM2_dom.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45975; NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF; 1.
DR PANTHER; PTHR45975:SF2; NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF00628; PHD; 3.
DR Pfam; PF15613; WSD; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 1.
DR SMART; SM00571; DDT; 1.
DR SMART; SM00249; PHD; 3.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 3.
DR PROSITE; PS00633; BROMODOMAIN_1; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
DR PROSITE; PS50827; DDT; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 2.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|ARBA:ARBA00023117, ECO:0000256|PROSITE-
KW ProRule:PRU00035}; Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000242188};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 173..233
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT DOMAIN 327..374
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 2488..2555
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 2582..2652
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT REGION 1..130
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 492..563
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1066..1224
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1285..1335
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1382..1467
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1696..1728
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2389..2410
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..56
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 65..98
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 99..120
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1078..1092
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1093..1139
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1174..1196
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1287..1302
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1303..1335
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1403..1431
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1432..1467
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1704..1720
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2673 AA; 297639 MW; 49F64A57D20AC6D4 CRC64;
MSTRGRRGRG RPPKTPLSSV RPRSNFLRKP KAYQNHGTPS SDPSSRSSTP VSTPGTPVRG
QGRGRSREAA QRGRHFIQHM IFEDDDQSRS SIDTEEKVSD VLDDLDENDP VSDASYEESD
SDCSNDSFST IGSSAGRRKL FFGRRPRTPE LLDDKDIARL KLPPTSTDLM IPIENLMQSL
SIYEVLRHFR TILRLSPFSF EDFCAAIMSD EVSSLLTEIH ITLYKALWRE EDGNNTAFGP
SDMKDSINIS LFFVDAFTWP ESIRALLDTE SDRYPEYKVA IESLEHPDFP FVPVEERLKV
LKTLTDLFLV TNNVREEIMN EGNIQYDDHC RNCHKLGDLL CCETCSAVYH LTCVEPPMEE
VPEEDWVCGV CRAHKIKGVT DCVSEAEKSG LLCRQEPIGF DRHGRKYWFL VRRIVVEGEN
EVWYYSTKGQ IDELLEVLDS EGWERDLVSA IYEFKEDVLK QMAVTHELTM SHKGNRKSAL
ELETAEIVKT QAERSLRKAQ EETERKIKEE EEDKRKKEEE ESAEKRNLEG KDSGELDGPK
ENGTLWEKDE IKEETQLGNL EKTDMDISEL IKTETTTSVT SNVTTSTTVS DNGTSTLQKT
ELLTTTTTTS TLMKSITTIS ESSEVVPKME DAKEEMMDQD IKTEVKEEIV ENNIDGSETN
VDVKSEQLSD LQNEIKQPVD IKKIDLKNLT QVSVNDKPKS TIMNVQSVCP NVKQTVLKMN
DDSSPQKQTR TVLIVNRDGN KVTLAVSKQP LDGTKAETTT IQQTSTTTTA SALAEARKIV
TRSKTGSLTP KQFTDSITGT TSVKTLSKLS SSSSDDLLVI NKDGDITRVT RSKSATVTSL
QHFKLGMECN FKNYVNQYAT NNLALNKYQH NEERDKRRYL SHKFSLTQAS EFKWNGANHG
KKSVVIQTLM LTIIQLESSI PSSFLHPNWP LHRQSWTNAV HMCRKPSDFS LALSILEACM
KPVIFNPVWS EALGHCRLQK ITSLDREEMK KREKEIRKRK EEEDEGRPLV WIKYTLGLKH
QVWKQRGEEY RVTGGQGWRW LSTTRKYQFV PQDTVGLRNV ARKIQARKRK AADATPKAAN
ASQKTASSPV STDKTEGEEE HMDVDQEITE PPKTTDSKED SAKEDLDSSM DKESVKCNSD
AGDCHAVNSV DAVDTNEETG ERVEVPVVKD SSPESADNGG SSDKNVTNNN EGQCSSVGDD
KMEVDIESVS PVKKSVSQTP APLKSDNVEK KLDLFNYTLP PKLDIPQVDV CRAMNERTHY
PKVTKPYAKL DLLLQRRLKQ EEIENKQRQA LQQQINWKLK SQNSPDGDKK DDSKDSSEEK
DTESKEDKSE DPLDLDEVTL PCYSYSCREK GKEFCFSPTC RKALLDESEL IDMDIAEDAI
EAEKDKSIAE MSMEDEDVDI EGDKEEKMDK KEKSEEKDSL VDVEKDDEGT NKNTNSSSFT
SKTPSDSSSS ATASEASKTP TTTSPATTSA ISSALSAMKS PASRAAAVAQ LLANRPGLKA
FTQAQLLLKQ AIEKMSVQEL KSKMPPARST KEPIKLVKYA KFGQKPTAKK KASLPPCHKY
LTPSRKRSAL VLEKHDLRKM ARTKGLIETK QFNYNCKMNN VNWIYPCPRP LFRTSWRYRT
QTVKSFGGVG LQLRILWACL RWDDLSIKPP AGGTNTVSTE TEITTKELLK RRDVGRDGLR
SEFQVRKIVV PLGLPSQPKE KYTPQRSGLR ERRRAESPKQ TEPSVTETWT PEEELELWEI
KQFGEKLAKQ RAAIQEKSSQ DSVKTTVNAV QLKAQLEMQL KQQRLALQQK RMMESQGSTT
ATTTSTVTVS AVGTTSLIST VQSTAGGTII KPATTSNSIL GGTSILKTVQ VQPKTIIAGS
QGTPGRSLVR FQIPRSAVQQ IQSSNSSNIT LAPKPGLVAT AATTNTVTSP ARVVVPAPVS
TAQSLTPKVQ LRPQVVAQGV PGQVQNLQII QGPQGQLQVR GLLPGQQIIR LPDGRLQLLS
MPQTPQVAAA TPTPTVTPAT TVATPTLVPP RTQLAIRPQT SIIVTNATGG TQTATTPARI
IIPSQNLPTA LGSSSPGISL VSAAKEGGLV ATVVKGSSPP SISLAAPKVI APGLVTGSAT
MSGTQAVTMT TSSAAGALAS AIKTITLQKP VSSTTIPSPI TVTSLPQMVS GGLPKVITAT
RAGLPGQLIV QTPRPPGQPL LMARPQVPTT VSTAPVTSVS AAAATKYAVT PQVVQQVVRQ
ALMQNQTPEI QAKLLAMQRL MTQPKTSSAI AELADAITIS TASSEAGVEG AKFPIAALSK
TQTPTVAVDL NRPRQFKTTV VEKEEQNRLT VCGQVLRNVI EKIEKKERDD GRRMKKQEME
EEKHKRLMVA KLQGTLFKHK EALKKEILKK RSIMEKNLQQ EIQAEVNEQL KKRKKKPDSP
GRPLVTVTSQ KAPLLNQDQT IMTEEPKRKK QKIISTGGRA FNPKEKLYCV CKLPYDTTKF
YIGCDLCSNW FHGDCVGISE GRAKTIDTYV CGECKKQKET ATEELYCLCR TPYDEAQFYI
GCDRCQDWFH GRCVGVSQGE ADHIDTYICP NCMRKEEADP VSQKELLDRD YDTLRRLVKS
LQSHKMAWPF LEAVDRNEVP DYYHVVKDPM DLTTVEKRLQ KKKYHRLKDF VKDVTKIFDN
CRLYNPTDTP FYQCAEVLET FFVQKLKSVK ERI
//
