ID A0A210QQ54_MIZYE Unreviewed; 1039 AA.
AC A0A210QQ54;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Transcription initiation factor TFIID subunit 4 {ECO:0000313|EMBL:OWF50862.1};
GN ORFNames=KP79_PYT13822 {ECO:0000313|EMBL:OWF50862.1};
OS Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
OC Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae;
OC Mizuhopecten.
OX NCBI_TaxID=6573 {ECO:0000313|EMBL:OWF50862.1, ECO:0000313|Proteomes:UP000242188};
RN [1] {ECO:0000313|Proteomes:UP000242188}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PY_sf001 {ECO:0000313|Proteomes:UP000242188};
RX PubMed=28812685; DOI=10.1038/s41559-017-0120;
RA Wang S., Zhang J., Jiao W., Li J., Xun X., Sun Y., Guo X., Huan P.,
RA Dong B., Zhang L., Hu X., Sun X., Wang J., Zhao C., Wang Y., Wang D.,
RA Huang X., Wang R., Lv J., Li Y., Zhang Z., Liu B., Lu W., Hui Y., Liang J.,
RA Zhou Z., Hou R., Li X., Liu Y., Li H., Ning X., Lin Y., Zhao L., Xing Q.,
RA Dou J., Li Y., Mao J., Guo H., Dou H., Li T., Mu C., Jiang W., Fu Q.,
RA Fu X., Miao Y., Liu J., Yu Q., Li R., Liao H., Li X., Kong Y., Jiang Z.,
RA Chourrout D., Li R., Bao Z.;
RT "Scallop genome provides insights into evolution of bilaterian karyotype
RT and development.";
RL Nat. Ecol. Evol. 1:120-120(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF4 family.
CC {ECO:0000256|ARBA:ARBA00006178}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWF50862.1}.
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DR EMBL; NEDP02002420; OWF50862.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A210QQ54; -.
DR STRING; 6573.A0A210QQ54; -.
DR EnsemblMetazoa; XM_021497081.1; XP_021352756.1; LOC110449915.
DR Proteomes; UP000242188; Unassembled WGS sequence.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR GO; GO:0006366; P:transcription by RNA polymerase II; IEA:UniProt.
DR CDD; cd08045; TAF4; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR Gene3D; 1.20.120.1110; TAFH/NHR1 domain; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR045144; TAF4.
DR InterPro; IPR007900; TAF4_C.
DR InterPro; IPR037249; TAFH/NHR1_dom_sf.
DR InterPro; IPR003894; TAFH_NHR1.
DR PANTHER; PTHR15138; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR PANTHER; PTHR15138:SF14; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR Pfam; PF05236; TAF4; 1.
DR Pfam; PF07531; TAFH; 1.
DR SMART; SM00549; TAFH; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
DR SUPFAM; SSF158553; TAFH domain-like; 1.
DR PROSITE; PS51119; TAFH; 1.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000313|EMBL:OWF50862.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein biosynthesis {ECO:0000313|EMBL:OWF50862.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000242188};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 573..668
FT /note="TAFH"
FT /evidence="ECO:0000259|PROSITE:PS51119"
FT REGION 904..926
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 947..991
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 961..991
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1039 AA; 111686 MW; 86831FF94C08E933 CRC64;
MATANFIDDL ITSEIDESAV SALVGALEGQ LASPTHKDNS QSISESSINN NHITTASTPV
ACTASSFNIV QTNVTQGLKG LSLPNSVTVN SVTSPLVKLT QSDPQIIGIN SIINSNNVAA
SNNNTQNNRE SPASNSSRVV NNQHAVRIIP NTQPHVNSRS SPLPQAIVNS NSLVHTNHIP
SANSPLIDLN RTTHSPNVNT RIVISKPGET VVDQKSVIIP QVTSSAGGIT IPQQYSSHQD
VVLKPGHIIL KHDNVNSGNV NAVKQERVTA LKQEGSMNTQ QHSQFLIKNE QHTTRSPISN
VKHEGCPTIQ TIQTVHGTQH IQTGSVPSAA GSQITQATNV HIVNAPIKGG VAGNPSVITV
RTPGQAQPGQ VVMRQQTPHS SGVPMHVVSV SGSNVVPRFT NSKGAVARVA TASPARQQQI
NIAPRPGTTA GTITLPQGML PHGGMLMKNE QGQFVIVTAN QGGVQQAVST TMASSTTGHR
IQYVRPPTTV QAHARPPTTQ IVTIQHPSGT PIAGQHQTVL RQTVPSSGAP ALVSTASSQV
VQTVRATNPS MAPHTSTAPG TTQSSGQVQQ QPLDNVKKCK NFLSTLLKLA AGQPKETVKN
VRELIQGLID GKVEPEAFTE RLQAELKSSP QPYLVPFLKK SLPLLRRSLI QNKMSIEGVR
APPVSVLQQN VMPTAATSVG QTQNQIPHLL HTAKSQQGMI QVQHIQKGVA HQRGSLPKTV
VTMAGRSQVA HHGVQGLPTV STIQGQTKTH GSTAGHREKP KYDSLKDDDD INDVATMGGV
NLSEESKNIL ATNADFIGTQ IRSCKDEAFL HHATLQSRIS AIAKKHGVDE VSSDVINLVS
HAAQERMRDV LEKLATIAEH RIEIYKMNDR FELTKDGKSQ LKFIEELDKL EKKRHEEQEW
EKIMKAAKSR SKHEDPEQQK IKQKAKELQQ AEIERLRQEE ANLTALAAIG PRKKRKTDFG
ESSQGSSGGS NLSNGLGSSS SRSSGHASSN RSTVMAIVWR AMEMTLGNHV WCNRETDCCV
RRPRETNLGS HIGSHMKAD
//
