ID A0A218UB58_9PASE Unreviewed; 1267 AA.
AC A0A218UB58;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Vigilin {ECO:0000313|EMBL:OWK50642.1};
GN Name=HDLBP {ECO:0000313|EMBL:OWK50642.1};
GN ORFNames=RLOC_00012208 {ECO:0000313|EMBL:OWK50642.1};
OS Lonchura striata domestica (Bengalese finch).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae;
OC Estrildinae; Lonchura.
OX NCBI_TaxID=299123 {ECO:0000313|EMBL:OWK50642.1, ECO:0000313|Proteomes:UP000197619};
RN [1] {ECO:0000313|EMBL:OWK50642.1, ECO:0000313|Proteomes:UP000197619}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=White83orange57 {ECO:0000313|EMBL:OWK50642.1};
RA Colquitt B.M., Brainard M.S.;
RT "Genome of assembly of the Bengalese finch, Lonchura striata domestica.";
RL Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWK50642.1}.
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DR EMBL; MUZQ01000519; OWK50642.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A218UB58; -.
DR STRING; 299123.ENSLSDP00000012105; -.
DR OrthoDB; 5489311at2759; -.
DR Proteomes; UP000197619; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd22405; KH-I_Vigilin_rpt1; 1.
DR CDD; cd22413; KH-I_Vigilin_rpt10; 1.
DR CDD; cd22414; KH-I_Vigilin_rpt11; 1.
DR CDD; cd22415; KH-I_Vigilin_rpt12; 1.
DR CDD; cd22416; KH-I_Vigilin_rpt13; 1.
DR CDD; cd22417; KH-I_Vigilin_rpt14; 1.
DR CDD; cd22418; KH-I_Vigilin_rpt15; 1.
DR CDD; cd22406; KH-I_Vigilin_rpt2; 1.
DR CDD; cd22407; KH-I_Vigilin_rpt3; 1.
DR CDD; cd22408; KH-I_Vigilin_rpt4; 1.
DR CDD; cd22409; KH-I_Vigilin_rpt5; 1.
DR CDD; cd02394; KH-I_Vigilin_rpt6; 1.
DR CDD; cd22410; KH-I_Vigilin_rpt7; 1.
DR CDD; cd22411; KH-I_Vigilin_rpt8; 1.
DR CDD; cd22412; KH-I_Vigilin_rpt9; 1.
DR Gene3D; 3.30.1370.10; K Homology domain, type 1; 13.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR PANTHER; PTHR10627; SCP160; 1.
DR PANTHER; PTHR10627:SF34; VIGILIN; 1.
DR Pfam; PF00013; KH_1; 14.
DR SMART; SM00322; KH; 14.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 13.
DR PROSITE; PS50084; KH_TYPE_1; 14.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000197619};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT DOMAIN 148..216
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 220..288
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 293..361
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 362..428
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 433..501
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 505..574
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 579..647
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 651..720
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 725..794
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 798..867
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 871..971
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 972..1038
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 1050..1121
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 1125..1194
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT REGION 28..47
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 911..945
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1236..1267
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 775..802
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 927..945
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1267 AA; 141669 MW; 123BC09C7561785C CRC64;
MSSVAVLTQE SFAEHRSGLA QQQVKVTALN SEEENDPPTY KEAFPPLPEK APCLEAAQEP
AGPWSKIRPI KASVITQVFH VPLEERKYKD MNQFGEGEQA KICLDIMQKT GAHLELSLAK
DQGLSIMVSG KLEAVMKARK EIVARLQTQA SATVAIPKEH HRFVIGKNGE KLQDLELKTA
TKIQIPRPDD PSNQIKITGT KEGIEKARHE ILLISAEQDK RAVERLDVEK VYHPFIAGPY
NKLVSELMQE TGTRINIPPP SVNKTEIVFT GEKEQLAQAV ARVKKIYEEK KKKTTTIAVE
VKKSQHKYVI GPKGNSLQEI LEKTGVSVEI PPTDSSSETV ILRGEPEKLG QALTEVYAKA
NSFTVSSVSA PSWLHRFIIG KKGQNLAKIT QQMPKVHIEF TEGEDKITLE GPTEDVNVAQ
EQIEVMVKDL INRMDYAEIN VDHKFHRHLI GKNGANINRI KDLYKVSVRI PPDNEKSNLI
RIEGDPQGVQ QAKKELLELA SRMENERTKD LIIEQKFHRT IIGQKGERIR EIREKFPDVI
INFPDPAHKS DIVQLRGPKN EVEKCTKYMQ KMVADLVENS FSISVPIFKQ FHKNIIGKGG
ANIKKIREES NTKIDLPAEN SNSETIVITG KRANCEAARH RILAIQKELA NITEVEVSIP
SKLHNSLIGA KGRFIRSIME ECGGVHIHFP TEGSGSDTVT IRGPAQDVEK AKKQLLHLAE
EKQTKSYTVD LRAKPEYHKF LIGKGGGNIR KVRDNTGARI IFPTSEDKDQ ELITIMGTEE
AVKEAQKELE ALIKNLDNVV EDSMVVDPKH HRHFVIRRGQ VLREIADEYG GVMVSFPRSG
TQSDKVTLKG AKDCVEAAKK RIQEIIEDLE AQVTIECTIP QKFHRSIMGP KGSRIQQITR
DYGVQIKFPD REENPAPVVE PTVQENGEEG GEGKEGKDTD PSSPKKCDII IISGRREKCE
AAKEALQALV PVTIEVEVPF DLHRYIIGQK GSGIRKMMDE FEVNIQVPAP ELQSDIITIT
GLATNLDRAK VGLLERVKEL QAEQEDRALR SFKLTVTVDP KYHPKIIGRK GAVITQIRTE
HEVNIQFPDK DDESQAQDQI TITGYEKNAE AARDAIMKIV GELEQMVSED VTLDHRVHAR
IIGARGKAIR KIMDEFKVDI RFPQSGAPDP NCVTVTGLPE NVEEAIDHIL NLEEEYLADV
VDNEAMQVYM KPSSHEESKA PSKGFVVRDA PWATVNNEKA PDMSSSEDFP SFGAQVAPKT
LPWGPKR
//
