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Database: UniProt
Entry: A0A218UBT0_9PASE
LinkDB: A0A218UBT0_9PASE
Original site: A0A218UBT0_9PASE 
ID   A0A218UBT0_9PASE        Unreviewed;       586 AA.
AC   A0A218UBT0;
DT   27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT   27-SEP-2017, sequence version 1.
DT   05-JUN-2019, entry version 6.
DE   SubName: Full=U4/U6.U5 tri-snRNP-associated protein 2 {ECO:0000313|EMBL:OWK51145.1};
GN   Name=USP39 {ECO:0000313|EMBL:OWK51145.1};
GN   ORFNames=RLOC_00000712 {ECO:0000313|EMBL:OWK51145.1};
OS   Lonchura striata domestica (Bengalese finch).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea;
OC   Estrildidae; Estrildinae; Lonchura.
OX   NCBI_TaxID=299123 {ECO:0000313|EMBL:OWK51145.1, ECO:0000313|Proteomes:UP000197619};
RN   [1] {ECO:0000313|EMBL:OWK51145.1, ECO:0000313|Proteomes:UP000197619}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=White83orange57 {ECO:0000313|EMBL:OWK51145.1};
RA   Colquitt B.M., Brainard M.S.;
RT   "Genome of assembly of the Bengalese finch, Lonchura striata
RT   domestica.";
RL   Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:OWK51145.1}.
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DR   EMBL; MUZQ01000463; OWK51145.1; -; Genomic_DNA.
DR   Proteomes; UP000197619; Unassembled WGS sequence.
DR   GO; GO:0036459; F:thiol-dependent ubiquitinyl hydrolase activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0016579; P:protein deubiquitination; IEA:InterPro.
DR   GO; GO:0000245; P:spliceosomal complex assembly; IEA:InterPro.
DR   CDD; cd02669; Peptidase_C19M; 1.
DR   Gene3D; 3.30.40.10; -; 1.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR001394; Peptidase_C19_UCH.
DR   InterPro; IPR033809; USP39.
DR   InterPro; IPR028889; USP_dom.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR001607; Znf_UBP.
DR   PANTHER; PTHR21646:SF16; PTHR21646:SF16; 1.
DR   Pfam; PF00443; UCH; 1.
DR   Pfam; PF02148; zf-UBP; 1.
DR   SMART; SM00290; ZnF_UBP; 1.
DR   SUPFAM; SSF54001; SSF54001; 1.
DR   PROSITE; PS50235; USP_3; 1.
DR   PROSITE; PS50271; ZF_UBP; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000197619};
KW   Metal-binding {ECO:0000256|SAAS:SAAS01044152};
KW   Reference proteome {ECO:0000313|Proteomes:UP000197619};
KW   Zinc {ECO:0000256|SAAS:SAAS01044373};
KW   Zinc-finger {ECO:0000256|SAAS:SAAS01044352}.
FT   DOMAIN      143    204       UBP-type. {ECO:0000259|PROSITE:PS50271}.
FT   DOMAIN      246    576       USP. {ECO:0000259|PROSITE:PS50235}.
FT   ZN_FING     143    204       UBP-type. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00502}.
FT   REGION        1    117       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A218UBT0}.
FT   COMPBIAS      1     65       Polyampholyte. {ECO:0000256|MobiDB-lite:
FT                                A0A218UBT0}.
FT   COMPBIAS     91    117       Polyampholyte. {ECO:0000256|MobiDB-lite:
FT                                A0A218UBT0}.
SQ   SEQUENCE   586 AA;  67517 MW;  6530EB3F5D6DC523 CRC64;
     MSSRGRRDRD SRDPREPREP REPREPRGAS RSRRDADAER PRGRRDAERE RARREAAEAL
     PVDLARVKRE PGTGTGTGSG VWGGSGSAAP VRVKREREPD GDSDPEPEPA VRYGRFDPED
     QRSRHCPYLD TINKSVLDFD FEKLCSISLS HINVYACLVC GKYFQGRGLK SHAYIHSVQL
     SHHVFLNLHT LKFYCLPDNY EIIDSSLEDI TYVLKPTFTA QHIAHLDKQA KLSRAYDGTT
     YLPGIVGLNN IKANDYANAV LQALSNVPPL RNYFLEEENY RRIQRPPGDI MFLLVQRFGE
     LMRKLWNPRN FKAHVSPHEM LQAVVLCSKK NFQITKQGDG VEFLSWFLNA LHAALGGTKR
     KKKTIVTDVF QGSMRIFTKK LPHPDLPAEE KAQLLQNSEY QERMVESTFL YLTLDLPTAP
     LYKDEKEQLI IPQVPLFSIL AKFNGSTEKE YKTYKENFLK RFQLTRLPPY LIFCIKRFTK
     NNFFVEKNPT IVNFPITNVD LREYLSEEVQ AAHSHTTYDL IANIVHDGKP SEGSYRIHVL
     HHGTGKWYEL QDLQVTDILP QMITLSEAYI QIWKRREEDE TNQQGA
//
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