ID A0A218UI04_9PASE Unreviewed; 630 AA.
AC A0A218UI04;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 22-FEB-2023, entry version 17.
DE SubName: Full=MHC class II transactivator {ECO:0000313|EMBL:OWK53218.1};
GN Name=CIITA {ECO:0000313|EMBL:OWK53218.1};
GN ORFNames=RLOC_00010491 {ECO:0000313|EMBL:OWK53218.1};
OS Lonchura striata domestica (Bengalese finch).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae;
OC Estrildinae; Lonchura.
OX NCBI_TaxID=299123 {ECO:0000313|EMBL:OWK53218.1, ECO:0000313|Proteomes:UP000197619};
RN [1] {ECO:0000313|EMBL:OWK53218.1, ECO:0000313|Proteomes:UP000197619}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=White83orange57 {ECO:0000313|EMBL:OWK53218.1};
RA Colquitt B.M., Brainard M.S.;
RT "Genome of assembly of the Bengalese finch, Lonchura striata domestica.";
RL Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWK53218.1}.
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DR EMBL; MUZQ01000298; OWK53218.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A218UI04; -.
DR STRING; 299123.ENSLSDP00000001684; -.
DR Proteomes; UP000197619; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR008095; MHC_II_transact.
DR InterPro; IPR007111; NACHT_NTPase.
DR InterPro; IPR041267; NLRP_HD2.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR47189; MHC CLASS II TRANSACTIVATOR; 1.
DR PANTHER; PTHR47189:SF1; MHC CLASS II TRANSACTIVATOR; 1.
DR Pfam; PF05729; NACHT; 1.
DR Pfam; PF17776; NLRC4_HD2; 1.
DR PRINTS; PR01719; MHCIIACTVATR.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50837; NACHT; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000197619}.
FT DOMAIN 67..202
FT /note="NACHT"
FT /evidence="ECO:0000259|PROSITE:PS50837"
SQ SEQUENCE 630 AA; 73095 MW; D53233018968B509 CRC64;
MEREVNLDHL FIDRTLVQSQ TETKTGKNSA KAMEKELVTC SLQEKEKTAI DRSQIFQIPQ
RKDLDTKVIV VLGKAGMGKS ILIQKICQDW SNGEFSQFEF VFWFDCKQIS LPEKQYSLKE
LLLEFFVKPQ EGSKEIFEYM LQNPDKILLI FDGFKGLHDH ENFSRCSASQ PEKDLCSIKE
LLSGLIQKKM LNGCTLLFTA RPKDKLYQYV SKVDKTIEIV GFSPQQRELY ITKYFEESLY
CDSALKLIKE CEYLFSHCYS PVMCRFVCFL CETVLEMGEN SLPSTLTEVF LKFFKQKIMF
MQTDATTTQN QESLATLARV AWCLGEKHQS TMKSDLIPSK EVKEFALKYG FFLPFALPRR
SDSEEEEFGS TFSDFVIQNF LCALHLLLAE ELKDKNLTKY LSFLSKKKKP YNWLDLMPRF
LAGLMFLQDD PSFCSLSNED EKQSTKKQKT LLKYIRRLQI NTLCPERLLE LLCCVYETQN
NYLLQHVALR LEPELSFLGI VLTPPDVHVL HSVLKRSRKE FSLDLRNSSI DMQGLQALVS
LRNVTSFRAS LSDTVRLWKS LEQTKDYELL KASTEKFVLD PFKAKTMKDI RDLSDLVEMQ
EKMMNCVQEA SGCTSYEIPA IRNLRKLEFA
//