ID A0A218UN23_9PASE Unreviewed; 1905 AA.
AC A0A218UN23;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=AT-rich interactive domain-containing protein 1B {ECO:0000313|EMBL:OWK55145.1};
GN Name=ARID1B {ECO:0000313|EMBL:OWK55145.1};
GN ORFNames=RLOC_00000539 {ECO:0000313|EMBL:OWK55145.1};
OS Lonchura striata domestica (Bengalese finch).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae;
OC Estrildinae; Lonchura.
OX NCBI_TaxID=299123 {ECO:0000313|EMBL:OWK55145.1, ECO:0000313|Proteomes:UP000197619};
RN [1] {ECO:0000313|EMBL:OWK55145.1, ECO:0000313|Proteomes:UP000197619}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=White83orange57 {ECO:0000313|EMBL:OWK55145.1};
RA Colquitt B.M., Brainard M.S.;
RT "Genome of assembly of the Bengalese finch, Lonchura striata domestica.";
RL Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWK55145.1}.
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DR EMBL; MUZQ01000217; OWK55145.1; -; Genomic_DNA.
DR STRING; 299123.ENSLSDP00000021920; -.
DR Proteomes; UP000197619; Unassembled WGS sequence.
DR GO; GO:0035060; C:brahma complex; IEA:InterPro.
DR GO; GO:0016514; C:SWI/SNF complex; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR CDD; cd16877; ARID_ARID1B; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR038040; ARID_ARID1B.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR021906; BAF250/Osa.
DR InterPro; IPR033388; BAF250_C.
DR PANTHER; PTHR12656:SF11; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1B; 1.
DR PANTHER; PTHR12656; BRG-1 ASSOCIATED FACTOR 250 BAF250; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF12031; BAF250_C; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR PROSITE; PS51011; ARID; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000197619}.
FT DOMAIN 724..815
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT REGION 27..92
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 107..492
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 576..717
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 818..922
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 949..1027
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1089..1237
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1251..1278
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1372..1395
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1491..1563
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 29..64
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 115..132
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 148..164
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 193..255
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 291..327
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 343..361
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 371..387
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 400..420
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 429..491
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 576..612
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 632..646
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 647..662
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 672..716
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 830..865
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 904..920
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 954..990
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1107..1133
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1166..1196
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1203..1235
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1251..1266
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1372..1390
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1511..1529
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1545..1561
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1905 AA; 205744 MW; 382567EADA04565F CRC64;
MMMGPGGGAG LGKAGAGAAA AAGGFARFSG QNQHPSGATP TLNQLLTSPS PMMRSYGSSY
PDYSSPSAPP QPQPQAAAAA PGSQQAAAGM GMGKDMGAQY GAANPAWAAA QQRNHPAMSP
GNTGQAISRT QGSPMDPMVM KRPQLYGMGN NPHSQAQQSS PYPGQSYGPP GPQRYPVGMQ
GRAPAAMGGM QYPQQQIPPQ YGQQGVSGYC QQGQQPYYNQ QPQPQHLPPQ AQYLSQAQQR
YQAQQDMSQE GYGTRSQPPM APGKPNHEDL NLIQQERPSS LPDLSGSIDD LPTGTEATLS
SAVSASGSTS SQGEQSNPAQ SPFSPHASPH LSGIPGGPSP SPVGSPVGSN QSRSGPISPA
SIPGSQMPPQ PPGSQSESSS HPALSQSPMP QDRGFMAGIQ RNPQMSQYGP QQTGPSMSPH
PSPGGQVHPG IGSFQQSNSS GTYGPQMSQY GPQGNYSRPP TYSGVPNTSY SGPGPGMGIN
ANSQMHGQGP SQPCGSMPLG RMPSAGMQSR PFPGNMSSMT PNSPGMSQQG GPGMGPPMPT
VNRKAQEAAA AVMQAAANSA QSRQGNFPAM NQSGIMGSSS PYTQPMNNSS GLMNPQAPPY
SMAPNMVNSS AGNAPMGLAD MMTPGESKLP LPLKADGKEE GAPQPESKSK DSYSSQGISQ
PPTPGNLPVP SPMSPSSASI SSFHGDESDS ISSPGWPKTP SSPKSSSSTT TGEKITKVYE
LGNEPERKLW VDRYLTFMEE RGTPVASLPA VGKKPLDLFR LYVCVKEIGG LAQVNKNKKW
RELATTLNVG TSSSAASSLK KQYIQYLFAF ECKIERGEEP PPEVFSTGDT KKQPKIQPPS
PANSGSLQGP QTPQSTGSNS MTEVPGDLKP PTPASTPHGQ MTPMQGGRNS AVSVHDPFSD
VSDSAFPKRN SMTPNAPYQQ GINMPDMMGR MPYEPNKDPF GGMRKVPGSN EPFMTPGQMP
NSGIQDMYNQ SPSGAMSNMS MSQRQQFSYG SGYDRRHEPY GQQYPGQGPP SGQPPYGGHQ
PGMYPQQQNY KRHMDGMYGP PAKRHEGDMY NMQYGNQQQE MYNQYGNAYT GPDRRPMQGQ
YPYPYNRERM QGPGQMQQHG IPPQMIGGPM QSSSSSEGPQ QNMWPTRNDM PYPYQNRQGP
GGPAQAPPYP GMNRTDDMMV PDQRINHESQ WPSHVNQRQP SYMSSSASMQ PITRPPQSSY
QTPPSMPNHI SRAPSPASFQ RSLENRMSPS KSPFLPSMKM QKVIPTVPVS QVTGPPPQPP
PIRREITFPP GSVEASQPVL KPRRKITSKD IVTPEAWRVM MSLKSGLLAE STWALDTINI
LLYDDSTVAT FNLSQLSGFL ELLVEYFRKC LIDIFGILME YEVGDPGHKA LDHKAAKKDD
SQSLAEDTGK DENDECIDYF DEDEEEGEDE KVEGEEKSIV FSTPGAIADP SERPKQASKF
DKLPIKIVKK NNLFVVDRSD KLGRVQEFDS GLLHWQLGGG DTTEHIQTHF ESKMEIPPRR
KAPPPLNSPS KKKDLEGKGE SEEQQEKSIT ATIDDVLSAR PGALPEDSNS GSQTESSKFP
FGIHQAKSHR NIKLLEDEPR SRDETPLCTI THWQDSLAKR CICVSNIVRS LSFVPGNDTE
MSKHPGLVLI LGKLILLHHE HPERKRAPQT YEKEEEEDKG VACSKDEWWW DCLEVLRDNT
LVTLANISGQ LDLSAYTESI CLPILDGLLH WMVCPSAEAQ DPFPTVGPNS VLSPQRLVLE
TLCKLSIQDN NVDLILATPP FSRQEKLYAT LVRYVGDRKN PVCREMSMAL LSNLAQGDTL
AARAIAVQKG SIGNLISFLE DGVTMAQYQQ SQHNLMHMQP PPLEPPSVDM MCRAAKALLA
MARVDENRSE FLLHEGRLLD ISISAVLNSL VASVICDVLF QIGQL
//
