ID A0A218UV50_9PASE Unreviewed; 148 AA.
AC A0A218UV50;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE RecName: Full=Nuclear nucleic acid-binding protein C1D {ECO:0000256|ARBA:ARBA00015212, ECO:0000256|RuleBase:RU368003};
GN Name=C1D {ECO:0000313|EMBL:OWK57579.1};
GN ORFNames=RLOC_00010580 {ECO:0000313|EMBL:OWK57579.1};
OS Lonchura striata domestica (Bengalese finch).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae;
OC Estrildinae; Lonchura.
OX NCBI_TaxID=299123 {ECO:0000313|EMBL:OWK57579.1, ECO:0000313|Proteomes:UP000197619};
RN [1] {ECO:0000313|EMBL:OWK57579.1, ECO:0000313|Proteomes:UP000197619}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=White83orange57 {ECO:0000313|EMBL:OWK57579.1};
RA Colquitt B.M., Brainard M.S.;
RT "Genome of assembly of the Bengalese finch, Lonchura striata domestica.";
RL Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Plays a role in the recruitment of the exosome to pre-rRNA to
CC mediate the 3'-5' end processing of the 5.8S rRNA.
CC {ECO:0000256|RuleBase:RU368003}.
CC -!- SUBUNIT: Monomer and homodimer. {ECO:0000256|RuleBase:RU368003}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|RuleBase:RU368003}.
CC Nucleus, nucleolus {ECO:0000256|RuleBase:RU368003}. Nucleus
CC {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|RuleBase:RU368003}.
CC -!- SIMILARITY: Belongs to the C1D family. {ECO:0000256|ARBA:ARBA00009154,
CC ECO:0000256|RuleBase:RU368003}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWK57579.1}.
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DR EMBL; MUZQ01000122; OWK57579.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A218UV50; -.
DR STRING; 299123.ENSLSDP00000000398; -.
DR OrthoDB; 73913at2759; -.
DR Proteomes; UP000197619; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR InterPro; IPR011082; Exosome-assoc_fac/DNA_repair.
DR InterPro; IPR007146; Sas10/Utp3/C1D.
DR PANTHER; PTHR15341:SF3; NUCLEAR NUCLEIC ACID-BINDING PROTEIN C1D; 1.
DR PANTHER; PTHR15341; SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR; 1.
DR Pfam; PF04000; Sas10_Utp3; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|RuleBase:RU368003};
KW DNA-binding {ECO:0000256|RuleBase:RU368003};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU368003};
KW Reference proteome {ECO:0000313|Proteomes:UP000197619};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|RuleBase:RU368003};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552,
KW ECO:0000256|RuleBase:RU368003}.
FT REGION 123..148
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 134..148
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 148 AA; 17128 MW; D7671C5AB531A2B8 CRC64;
MEMSEDDNNM EEYPTEIHDY LTAFEKSLGS VDEMLKTMMS VSRNELLQKL DPLEQAKLDL
VSVYTLNSMF WVYLATQGIN PKEHPVKQEL ERIRTYMNKV KEIADKKKAS KLDKGAASRF
VKNALWEPNA ENEHNSKTSA KGKKQQRD
//
