GenomeNet

Database: UniProt
Entry: A0A218VTG6_PUNGR
LinkDB: A0A218VTG6_PUNGR
Original site: A0A218VTG6_PUNGR 
ID   A0A218VTG6_PUNGR        Unreviewed;       386 AA.
AC   A0A218VTG6;
DT   27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT   27-SEP-2017, sequence version 1.
DT   27-MAR-2024, entry version 31.
DE   SubName: Full=Heat shock factor protein HSF30-like {ECO:0000313|RefSeq:XP_031374970.1};
GN   Name=LOC116189445 {ECO:0000313|RefSeq:XP_031374970.1};
GN   ORFNames=CDL15_Pgr022125 {ECO:0000313|EMBL:OWM63380.1}, CRG98_008881
GN   {ECO:0000313|EMBL:PKI70648.1};
OS   Punica granatum (Pomegranate).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Myrtales; Lythraceae; Punica.
OX   NCBI_TaxID=22663 {ECO:0000313|EMBL:OWM63380.1, ECO:0000313|Proteomes:UP000197138};
RN   [1] {ECO:0000313|Proteomes:UP000197138}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Dabenzi {ECO:0000313|Proteomes:UP000197138};
RX   PubMed=28654223; DOI=10.1111/tpj.13625;
RA   Qin G., Xu C., Ming R., Tang H., Guyot R., Kramer E.M., Hu Y., Yi X.,
RA   Qi Y., Xu X., Gao Z., Pan H., Jian J., Tian Y., Yue Z., Xu Y.;
RT   "The pomegranate (Punica granatum L.) genome and the genomics of
RT   punicalagin biosynthesis.";
RL   Plant J. 91:1108-1128(2017).
RN   [2] {ECO:0000313|EMBL:OWM63380.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   TISSUE=Fresh leaf {ECO:0000313|EMBL:OWM63380.1};
RA   Xu C.;
RT   "The pomegranate genome and the genomics of punicalagin biosynthesis.";
RL   Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:PKI70648.1, ECO:0000313|Proteomes:UP000233551}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AG2017 {ECO:0000313|EMBL:PKI70648.1}, and cv. AG2017
RC   {ECO:0000313|Proteomes:UP000233551};
RC   TISSUE=Leaf {ECO:0000313|EMBL:PKI70648.1};
RA   Akparov Z., Amiraslanov A., Hajiyeva S., Abbasov M., Kaur K., Hamwieh A.,
RA   Solovyev V., Salamov A., Braich B., Kosarev P., Mahmoud A., Hajiyev E.,
RA   Babayeva S., Izzatullayeva V., Mammadov A., Mammadov A., Sharifova S.,
RA   Ojaghi J., Eynullazada K., Bayramov B., Abdulazimova A., Shahmuradov I.;
RT   "De-novo sequencing of pomegranate (Punica granatum L.) genome.";
RL   Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|RefSeq:XP_031374970.1}
RP   IDENTIFICATION.
RC   TISSUE=Leaf {ECO:0000313|RefSeq:XP_031374970.1};
RG   RefSeq;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the HSF family. {ECO:0000256|RuleBase:RU004020}.
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DR   EMBL; MTKT01006103; OWM63380.1; -; Genomic_DNA.
DR   EMBL; PGOL01000434; PKI70648.1; -; Genomic_DNA.
DR   RefSeq; XP_031374970.1; XM_031519110.1.
DR   STRING; 22663.A0A218VTG6; -.
DR   OrthoDB; 1117127at2759; -.
DR   Proteomes; UP000197138; Unassembled WGS sequence.
DR   Proteomes; UP000233551; Unassembled WGS sequence.
DR   Proteomes; UP000515151; Chromosome 1.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR000232; HSF_DNA-bd.
DR   InterPro; IPR027725; HSF_fam.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR10015; HEAT SHOCK TRANSCRIPTION FACTOR; 1.
DR   PANTHER; PTHR10015:SF338; HEAT STRESS TRANSCRIPTION FACTOR A-2; 1.
DR   Pfam; PF00447; HSF_DNA-bind; 1.
DR   PRINTS; PR00056; HSFDOMAIN.
DR   SMART; SM00415; HSF; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS00434; HSF_DOMAIN; 1.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000233551};
KW   Stress response {ECO:0000256|ARBA:ARBA00023016,
KW   ECO:0000313|RefSeq:XP_031374970.1}.
FT   DOMAIN          111..135
FT                   /note="HSF-type DNA-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS00434"
FT   REGION          1..70
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          298..319
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        14..31
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        38..55
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   386 AA;  42670 MW;  B8857B67F2A82E14 CRC64;
     MEGGGRLRTA KEEEQTQTFS PSSSHVKSTI SGGGCGGSCG GHSSSSSSSC ANQNRDLPRP
     MEGLSEAGPP PFLTKTFEIV DDPSTDGVVS WSVARNSFIV WDPHRFSSTL LPKYFKHSNF
     SSFIRQLNTY GFRKVDSDRW EFANEGFLGG QRHLLKTIKR RRHVSQHQRS PGSGGSCLEL
     GHFGMEPELE RLKRDRSVLM SEIVKLRQQQ QEARGHMLTV ETRLQSTERR QQQMLSFLAR
     ALSNPGIIGR MVHHSATGGT REICRAERGR KRRLMDRPSS EDLRLEEEVL MEMGRTGGLA
     GMQGGSGTAG PAPPRRGNSE TVNEMILEEL LSEDLMRGDP EEEILVGDQP EADAEVEDLI
     PGPAAWGEGL EDVVDQKGRL RSNELG
//
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