ID A0A218W174_PUNGR Unreviewed; 613 AA.
AC A0A218W174;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=SNW/SKI-interacting protein A-like {ECO:0000313|RefSeq:XP_031385986.1};
GN Name=LOC116199667 {ECO:0000313|RefSeq:XP_031385986.1};
GN ORFNames=CDL15_Pgr015486 {ECO:0000313|EMBL:OWM66060.1}, CRG98_003362
GN {ECO:0000313|EMBL:PKI76251.1};
OS Punica granatum (Pomegranate).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Lythraceae; Punica.
OX NCBI_TaxID=22663 {ECO:0000313|EMBL:OWM66060.1, ECO:0000313|Proteomes:UP000197138};
RN [1] {ECO:0000313|Proteomes:UP000197138}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Dabenzi {ECO:0000313|Proteomes:UP000197138};
RX PubMed=28654223; DOI=10.1111/tpj.13625;
RA Qin G., Xu C., Ming R., Tang H., Guyot R., Kramer E.M., Hu Y., Yi X.,
RA Qi Y., Xu X., Gao Z., Pan H., Jian J., Tian Y., Yue Z., Xu Y.;
RT "The pomegranate (Punica granatum L.) genome and the genomics of
RT punicalagin biosynthesis.";
RL Plant J. 91:1108-1128(2017).
RN [2] {ECO:0000313|EMBL:OWM66060.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Fresh leaf {ECO:0000313|EMBL:OWM66060.1};
RA Xu C.;
RT "The pomegranate genome and the genomics of punicalagin biosynthesis.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:PKI76251.1, ECO:0000313|Proteomes:UP000233551}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AG2017 {ECO:0000313|EMBL:PKI76251.1}, and cv. AG2017
RC {ECO:0000313|Proteomes:UP000233551};
RC TISSUE=Leaf {ECO:0000313|EMBL:PKI76251.1};
RA Akparov Z., Amiraslanov A., Hajiyeva S., Abbasov M., Kaur K., Hamwieh A.,
RA Solovyev V., Salamov A., Braich B., Kosarev P., Mahmoud A., Hajiyev E.,
RA Babayeva S., Izzatullayeva V., Mammadov A., Mammadov A., Sharifova S.,
RA Ojaghi J., Eynullazada K., Bayramov B., Abdulazimova A., Shahmuradov I.;
RT "De-novo sequencing of pomegranate (Punica granatum L.) genome.";
RL Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|RefSeq:XP_031385986.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_031385986.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the SNW family. {ECO:0000256|ARBA:ARBA00010197}.
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DR EMBL; MTKT01005556; OWM66060.1; -; Genomic_DNA.
DR EMBL; PGOL01000126; PKI76251.1; -; Genomic_DNA.
DR RefSeq; XP_031385986.1; XM_031530126.1.
DR STRING; 22663.A0A218W174; -.
DR OrthoDB; 5490078at2759; -.
DR Proteomes; UP000197138; Unassembled WGS sequence.
DR Proteomes; UP000233551; Unassembled WGS sequence.
DR Proteomes; UP000515151; Chromosome 3.
DR GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR InterPro; IPR017862; SKI-int_prot_SKIP.
DR InterPro; IPR004015; SKI-int_prot_SKIP_SNW-dom.
DR PANTHER; PTHR12096; NUCLEAR PROTEIN SKIP-RELATED; 1.
DR PANTHER; PTHR12096:SF0; SNW DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF02731; SKIP_SNW; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000233551}.
FT DOMAIN 185..344
FT /note="SKI-interacting protein SKIP SNW"
FT /evidence="ECO:0000259|Pfam:PF02731"
FT REGION 214..250
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 324..440
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 524..564
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 576..613
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 136..163
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 324..339
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 359..440
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 524..560
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 613 AA; 69277 MW; D8A867864F2E5F6F CRC64;
MASLNELLPP AKSATTTFYD HTNDPWFKQR FSSSAETEQA AVVKHNPVPP YLKRQGFVPR
KIEDFGDGGA FPEIHIAQYP LDMGRDKSGK PGPKILPVTV DANGNVAYDA IVKQNENAKK
IVYGQHKDLI PKILRNEEDQ DENEDLEKEI EETTQETKAA LEKIVNVRLS AAQPKNVPKQ
SSDSKFIKYK PSQQSAAFNS GAKERIIRMV EMPTDPLEPP KFKHKRVPKA SGSPPVPVMH
SPPRPVTVKD QQDWKIPPCI SNWKNPKGYT IPLDKRLAAD GRGLQEVQIN DNFAKLSEAL
YVAEQKAREA VAMRSKVQKE MLMKEKERKE QELRALAQKA RSERTGAAPP AAIPVPSEKG
GHDDVEMRVD YERDRERDRD RERERDRDYP RETREEREER LQREKIREER RRERERERRL
EAKDAAMGKK SKITRDRDRD ISEKVALGMA STGAGRGGEV MCDQRLFNQE KGMASGFATD
DQYNVYDKGL FTAQPTLSTL YRPSKDTDSD MYGGDADEQL QKILKTDRFK PDKPFAGASE
RAGPRERPVE FEKDAEEADP FGLDQFLTEV KKGKKAMEKV GSGGTMKASG GSSTRDGYEG
GSGRTRIGFE RGR
//
