ID A0A218WXZ3_PUNGR Unreviewed; 1742 AA.
AC A0A218WXZ3;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=Homeobox-DDT domain protein RLT1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=CDL15_Pgr016823 {ECO:0000313|EMBL:OWM77426.1};
OS Punica granatum (Pomegranate).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Lythraceae; Punica.
OX NCBI_TaxID=22663 {ECO:0000313|EMBL:OWM77426.1, ECO:0000313|Proteomes:UP000197138};
RN [1] {ECO:0000313|Proteomes:UP000197138}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Dabenzi {ECO:0000313|Proteomes:UP000197138};
RX PubMed=28654223; DOI=10.1111/tpj.13625;
RA Qin G., Xu C., Ming R., Tang H., Guyot R., Kramer E.M., Hu Y., Yi X.,
RA Qi Y., Xu X., Gao Z., Pan H., Jian J., Tian Y., Yue Z., Xu Y.;
RT "The pomegranate (Punica granatum L.) genome and the genomics of
RT punicalagin biosynthesis.";
RL Plant J. 91:1108-1128(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWM77426.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; MTKT01002534; OWM77426.1; -; Genomic_DNA.
DR Proteomes; UP000197138; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR007759; Asxl_HARE-HTH.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR044977; RLT1-3.
DR InterPro; IPR028942; WHIM1_dom.
DR InterPro; IPR028941; WHIM2_dom.
DR PANTHER; PTHR36968:SF13; HOMEOBOX-DDT DOMAIN PROTEIN RLT1; 1.
DR PANTHER; PTHR36968; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF05066; HARE-HTH; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF15612; WHIM1; 1.
DR Pfam; PF15613; WSD; 1.
DR SMART; SM00571; DDT; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50827; DDT; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS51913; HTH_HARE; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 13..73
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 513..572
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT DOMAIN 695..764
FT /note="HTH HARE-type"
FT /evidence="ECO:0000259|PROSITE:PS51913"
FT DNA_BIND 15..74
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 70..144
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 414..434
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 794..864
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 897..919
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1492..1594
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1611..1637
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1662..1742
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 107..127
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 794..835
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 847..861
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1512..1535
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1536..1561
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1623..1637
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1671..1695
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1716..1742
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1742 AA; 195871 MW; 78FC5E57945CA185 CRC64;
MEAGSEDAPK IGEPAKPKRQ MKTPFQLETL EKAYATETYP SEAMRAELSE KLGLTDRQLQ
MWFCHRRLKD KNNTPAKKPR KSSAAVSAPE YSKDPVFAEP EPGSGYGSGS GSGSGSGSGS
GSSPYGSREL QRMGYGRDGD DVGVGRRYGE SPRTIMELRA IACVEAQLGE PLREDGPILG
MEFDPLPPDA FGAPIGTMEE HIRPDHSYDN KLYGRRDAIS NKAVGRSVHE YQFLHDQPGI
RYNTHGQVSQ NHLHDVVTDG PSARAPSSSH GIQKLSNTHG VQGQLLRVCR VSQEDREGPG
ISASPGYDDR LQQRDPLTSM RLNSPQGAYP VSGVENSLAI SDGKVFHNDT GLHAGKRKTE
ERMRKEIERY DRERRKEEER LVREKQREEE RLLREQRKEM ERRERFLQKE YMRAEKKRQK
EEQRREKEAE RRKVAMEKAT ARRIAKESME LMEDEQLELM ELAAAKKGLP SIVHLDHDTL
QNLDMFRDSL SAFPPQTIPL KRPFAVQPWL SSEENAGNLL MAWRFLITFA DVLGLWPFTL
DEFVQAFHDY NSRLLGEIHL ALLKATIKDI EDVSRTSAAG LGTNQNGAAN PEGGHPQIVE
GAYAWGFDIQ KWQKHLNPLT WPEIFRQLAL SAGFGPQLKK RTVVQPHLQE GDEVKDCEDI
VSTLRSGSAA EKALAIMREK GLLLPRRSRH RLTPGTVKFA AFHVLSLEGS KGLTVLDLAD
KIQKSGLRDL STSKTPEASI SVALTRDTKL FERIAPSTYR VRAAYRKDPT DAEAILSEAR
KKIRIFENGL LAEEDADEVE RDDDAERDDD AERDEDAQRD EESEGDVDED PDADDIAAPL
GVIKEDDQYN QENELPVIKE EEPMLNDGMN MENENGRDFI SCPVNDFKDT AEQCGDGEGI
DDSKDQENME IDESNSGESW VRGLTEGEYS HLSVEERLNA LVALIGVANE GNSIRAVLED
RLEAANALKK QMWAEVQLDK SRLKDEFISK LDLSSFTGGR TEAQVRDFSV DGNQSPWPAA
DTKNTEASLS LAEDHKLLLG PQAGVQNDPS NLSTDRALVV VQDPSGVPDN SNHNGYVSRR
SRSQLKSYIA QRAEEIYVYR SLPLGLDRRR NRYWQFVASS SRNDPGSGRI FVELNNGSWR
LIDSEEAFDA LLMSLDVRGI RESHLRVMLL KIEKLFRENV RRSLESAPQI RSSVKNEAVE
MDSSPDCRGV GSPSSMVCGS SHDISEASSS FRIEIGRNQF EKKAALRRYQ DFLKWASREC
SNSFPIGAMR TGKRRSDPVL FICDSCLDTY LCETKHCFSC HATIADNFDF SRHVMECEDR
RKLDQKDGHV LVSSVPLGIR FLKGLLAYVE VLIPPEALQS FWTEDLRRSW GMKLSAFSSP
EEFLQMLTLL EGALRREYLS PEFESTRDLL SLAESSVQDY FDLEHVSVLP WIPQTIAASA
LRLLELESSI IYVKPEQPES RNVDSVREET VQRLPLKPVV LKSAKVDLPE GDQRIYLKGN
PGEVSNGRKS NKRGNVARDR TSGKKWQRRS SAARSDVSGR RNARNSENLL RQQQGRTQLA
QGGSYVRGRR TVRKRRAENK VGEQALLGHM GADTAGVGSR RLNEAWHHEP RYPAHVEEAS
VNSDSVEDDE NDNENENENE AVMGYDIEGN WGEGYAGTSN GWNRNFMKEE PGEEEEEEDM
GVSEEEEDYN ELEEEDTGQG FGGTMDMRGD VEYGGLEPME NDDEDDEEEE GSEMAGSEDY
SE
//
