ID A0A218XLD9_PUNGR Unreviewed; 705 AA.
AC A0A218XLD9;
DT 27-SEP-2017, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Pentatricopeptide repeat-containing protein At4g39530-like {ECO:0000313|RefSeq:XP_031389942.1};
GN Name=LOC116202505 {ECO:0000313|RefSeq:XP_031389942.1};
GN ORFNames=CDL15_Pgr028078 {ECO:0000313|EMBL:OWM85291.1}, CRG98_028657
GN {ECO:0000313|EMBL:PKI50927.1};
OS Punica granatum (Pomegranate).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Lythraceae; Punica.
OX NCBI_TaxID=22663 {ECO:0000313|EMBL:OWM85291.1, ECO:0000313|Proteomes:UP000197138};
RN [1] {ECO:0000313|Proteomes:UP000197138}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Dabenzi {ECO:0000313|Proteomes:UP000197138};
RX PubMed=28654223; DOI=10.1111/tpj.13625;
RA Qin G., Xu C., Ming R., Tang H., Guyot R., Kramer E.M., Hu Y., Yi X.,
RA Qi Y., Xu X., Gao Z., Pan H., Jian J., Tian Y., Yue Z., Xu Y.;
RT "The pomegranate (Punica granatum L.) genome and the genomics of
RT punicalagin biosynthesis.";
RL Plant J. 91:1108-1128(2017).
RN [2] {ECO:0000313|EMBL:OWM85291.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Fresh leaf {ECO:0000313|EMBL:OWM85291.1};
RA Xu C.;
RT "The pomegranate genome and the genomics of punicalagin biosynthesis.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:PKI50927.1, ECO:0000313|Proteomes:UP000233551}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AG2017 {ECO:0000313|EMBL:PKI50927.1}, and cv. AG2017
RC {ECO:0000313|Proteomes:UP000233551};
RC TISSUE=Leaf {ECO:0000313|EMBL:PKI50927.1};
RA Akparov Z., Amiraslanov A., Hajiyeva S., Abbasov M., Kaur K., Hamwieh A.,
RA Solovyev V., Salamov A., Braich B., Kosarev P., Mahmoud A., Hajiyev E.,
RA Babayeva S., Izzatullayeva V., Mammadov A., Mammadov A., Sharifova S.,
RA Ojaghi J., Eynullazada K., Bayramov B., Abdulazimova A., Shahmuradov I.;
RT "De-novo sequencing of pomegranate (Punica granatum L.) genome.";
RL Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|RefSeq:XP_031389942.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_031389942.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; MTKT01001287; OWM85291.1; -; Genomic_DNA.
DR EMBL; PGOL01002071; PKI50927.1; -; Genomic_DNA.
DR RefSeq; XP_031389942.1; XM_031534082.1.
DR STRING; 22663.A0A218XLD9; -.
DR OrthoDB; 367252at2759; -.
DR Proteomes; UP000197138; Unassembled WGS sequence.
DR Proteomes; UP000233551; Unassembled WGS sequence.
DR Proteomes; UP000515151; Chromosome 4.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 7.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000233551};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 75..109
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 210..244
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 383..413
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 457..491
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 705 AA; 77622 MW; B270A9821D1F4C2F CRC64;
MLTQSPHSPQ LHGNVTFPPN RCPLARQTLP AGPRAAADIG FGDTLDSLTS CAMSRDLRTG
SVLRGLVIKS GFGADAIAGN SLANMYSKCE LLDRAKQVFE EMPHRTVVSW TTLMSGYCSN
WESHMAISLF GQMLGEVELN EFTISVLLKA CAQCANTNDH QRLVEAAHCY VVKYGLSLDS
FLANSLVDSY AKCGKLSDAE KVLQRSGCTD VVSWTSLISG AVLNGYAREA LSYFFRMQED
GKTPNEITVL SLLRACSLIG ELEFFRWVHG AILKTGWGWN DFVVNSLMEL YLVNGCFLEG
IEVFCKFLST SEDQHVKAET LALILQGCSE LGLFGLGKQI HCFLIKCGII PLLVIENSLV
DMYSKNECIG SAVRLFSRMA NRDIVSWNTI ITCLVRRGDY SRALSHFREI HRERGDGESG
PDFVTMLAVL QACSDMGSYR LGQVIHGFIT KTGFVCDTFV QNSLIDMYGK TGRLDSAHGV
FKEMLSKDIS SWNSMIGAFG VNGNGHSAMT VFRELTRSGI EQPNEITFVN ILSACDHAGI
MKEGLEIFNC IESVYGTRPS TEHLACVVDM LGRSGRLDEA EAFIRNVPIK PDRAAWGALL
SSCCAFGRVD LAERAARELS VLDWDNKAWR VAMSNIYAGV GRWEDVAKVR LEMKELNGKE
AAWSSVEVHG QDIAFMVNDT THPECASIYE TLHSITGHIA FNSTA
//
