ID A0A220W2Z6_9SPHN Unreviewed; 324 AA.
AC A0A220W2Z6;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=HTH-type transcriptional regulator VirS {ECO:0000313|EMBL:ASK87193.1};
GN Name=virS {ECO:0000313|EMBL:ASK87193.1};
GN ORFNames=SPHFLASMR4Y_00403 {ECO:0000313|EMBL:ASK87193.1};
OS Sphingorhabdus sp. SMR4y.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingorhabdus.
OX NCBI_TaxID=2584094 {ECO:0000313|EMBL:ASK87193.1, ECO:0000313|Proteomes:UP000198359};
RN [1] {ECO:0000313|EMBL:ASK87193.1, ECO:0000313|Proteomes:UP000198359}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SMR4y {ECO:0000313|EMBL:ASK87193.1,
RC ECO:0000313|Proteomes:UP000198359};
RA Topel M., Pinder M.I.M., Johansson O.N., Kourtchenko O., Godhe A.,
RA Clarke A.K.;
RT "Genome Sequence of Sphingorhabdus flavimaris Strain SMR4y Isolated from a
RT culture of the Diatom Skeletonema marinoi.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP022336; ASK87193.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A220W2Z6; -.
DR KEGG; sfla:SPHFLASMR4Y_00403; -.
DR OrthoDB; 9805730at2; -.
DR Proteomes; UP000198359; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR032687; AraC-type_N.
DR InterPro; IPR018060; HTH_AraC.
DR PANTHER; PTHR47894; HTH-TYPE TRANSCRIPTIONAL REGULATOR GADX; 1.
DR PANTHER; PTHR47894:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR VQSM; 1.
DR Pfam; PF12625; Arabinose_bd; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000198359};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 235..324
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 324 AA; 36571 MW; 653D255FE49E382F CRC64;
MSAGAHLRIP ATYVNALIRQ YRDVLDDDAI SLDLAKLETN SGIAQTDIQS LFALIEALNK
QVGPEWPIEA SFAWRSQMHG TIDVAARSAR TLGDALNVFA RFGRVRAPFA VINKNVWSKT
TALKIQPSVS MEDSVWQALA EFIMLSTTAI LNQITDDRLS GVTFEMPNRT FQHKQSLEDA
FGVPTQFGGT QFTMTFTNET CSLVLPFHDP LLFKNTVEQL QSETEQLSHH NWIVEDVRRL
LSSQNHIRPS AQFVADELGL SRRSLVRKLT ANQTSFRTML DDHLKERATK MLGQDKMSKE
AISEALGYTD RTSFSRACRR WFDI
//
