ID A0A223V9R4_9FLAO Unreviewed; 407 AA.
AC A0A223V9R4;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=RNA methyltransferase {ECO:0000313|EMBL:ASV31880.1};
GN Name=rsmB {ECO:0000313|EMBL:GGD85357.1};
GN ORFNames=CJ263_17575 {ECO:0000313|EMBL:ASV31880.1}, GCM10011412_23920
GN {ECO:0000313|EMBL:GGD85357.1};
OS Maribacter cobaltidurans.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Maribacter.
OX NCBI_TaxID=1178778 {ECO:0000313|EMBL:ASV31880.1, ECO:0000313|Proteomes:UP000215244};
RN [1] {ECO:0000313|EMBL:ASV31880.1, ECO:0000313|Proteomes:UP000215244}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B1 {ECO:0000313|EMBL:ASV31880.1,
RC ECO:0000313|Proteomes:UP000215244};
RA Wu Y.-H., Cheng H., Xu X.-W.;
RT "The complete genome sequence of Maribacter sp. B1, isolated from deep-sea
RT sediment.";
RL Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:GGD85357.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CGMCC 1.15508 {ECO:0000313|EMBL:GGD85357.1};
RX PubMed=30832757;
RA Wu L., Ma J.;
RT "The Global Catalogue of Microorganisms (GCM) 10K type strain sequencing
RT project: providing services to taxonomists for standard genome sequencing
RT and annotation.";
RL Int. J. Syst. Evol. Microbiol. 69:895-898(2019).
RN [3] {ECO:0000313|EMBL:GGD85357.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CGMCC 1.15508 {ECO:0000313|EMBL:GGD85357.1};
RA Sun Q., Zhou Y.;
RL Submitted (DEC-2022) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC superfamily. RsmB/NOP family. {ECO:0000256|PROSITE-ProRule:PRU01023}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU01023}.
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DR EMBL; CP022957; ASV31880.1; -; Genomic_DNA.
DR EMBL; BMJL01000005; GGD85357.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A223V9R4; -.
DR KEGG; marb:CJ263_17575; -.
DR OrthoDB; 9810297at2; -.
DR Proteomes; UP000215244; Chromosome.
DR Proteomes; UP000603042; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR GO; GO:0001510; P:RNA methylation; IEA:InterPro.
DR CDD; cd02440; AdoMet_MTases; 1.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR InterPro; IPR049560; MeTrfase_RsmB-F_NOP2_cat.
DR InterPro; IPR001678; MeTrfase_RsmB-F_NOP2_dom.
DR InterPro; IPR023267; RCMT.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR PANTHER; PTHR22807; NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR22807:SF77; SUN PROTEIN; 1.
DR Pfam; PF01189; Methyltr_RsmB-F; 1.
DR PRINTS; PR02008; RCMTFAMILY.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR PROSITE; PS51686; SAM_MT_RSMB_NOP; 1.
PE 3: Inferred from homology;
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603, ECO:0000256|PROSITE-
KW ProRule:PRU01023}; Reference proteome {ECO:0000313|Proteomes:UP000215244};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU01023};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691,
KW ECO:0000256|PROSITE-ProRule:PRU01023};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|PROSITE-
KW ProRule:PRU01023}.
FT DOMAIN 142..403
FT /note="SAM-dependent MTase RsmB/NOP-type"
FT /evidence="ECO:0000259|PROSITE:PS51686"
FT ACT_SITE 354
FT /note="Nucleophile"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT BINDING 256
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT BINDING 301
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
SQ SEQUENCE 407 AA; 46453 MW; 91EE05DA03AB9BB5 CRC64;
MRLHRNLVFA VIDALNLIFN EGEYADKVVQ KVLKFDKRWG SRDRGFIAET TYEMVRYKRL
YAEIAEVKAP FSRPDLFRMW AVWAVLSGIK LPDWKQIEPT PERRIKGRFD ELSKVRKYRE
AIPDWMDTLC EKALGEKLWT AEIAKLNQPA DVILRTNTLK TTKEKLRKAL LDEDILTEPI
KGYPLALRLP ERANVFVTQS FKDGLFEVQD ASSQLVAELL DVQPGQRVVD TCAGAGGKSL
HLAALMENKG QLIAMDIYGS KLKELKRRAR RNGAHNIEPR EITSTKVIKK LYDSADRVLI
DAPCTGLGVI RRNPDTKWKL QPEFLEKITK TQQEILRSYS KMVKSGGKLV YATCSILPQE
NRDQVNSFLA SEEGSGFSLV KEKKIYASKS GFDGFYMALL EKKTKDS
//
