ID A0A225DLM1_9BACT Unreviewed; 1206 AA.
AC A0A225DLM1;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE SubName: Full=Transcription accessory protein (S1 RNA-binding domain) {ECO:0000313|EMBL:OWK40524.1};
GN ORFNames=FRUB_05443 {ECO:0000313|EMBL:OWK40524.1};
OS Fimbriiglobus ruber.
OC Bacteria; Planctomycetota; Planctomycetia; Gemmatales; Gemmataceae;
OC Fimbriiglobus.
OX NCBI_TaxID=1908690 {ECO:0000313|EMBL:OWK40524.1, ECO:0000313|Proteomes:UP000214646};
RN [1] {ECO:0000313|Proteomes:UP000214646}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SP5 {ECO:0000313|Proteomes:UP000214646};
RA Ravin N.V., Rakitin A.L., Ivanova A.A., Beletsky A.V., Kulichevskaya I.S.,
RA Mardanov A.V., Dedysh S.N.;
RT "Genome analysis of Fimbriiglobus ruber SP5, the first member of the order
RT Planctomycetales with confirmed chitinolytic capability.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWK40524.1}.
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DR EMBL; NIDE01000008; OWK40524.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A225DLM1; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000214646; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 2.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 2.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 2.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 2.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000214646}.
FT DOMAIN 900..969
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 1..117
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 965..1206
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..45
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 47..62
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 87..113
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 974..1006
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1090..1105
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1118..1132
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1206 AA; 128919 MW; 0A9B0291F11243D9 CRC64;
MNSADPTPTP TNPDLEPAAH APAGEPPAAP VSEAVAPPPE SPTPVETAPA EQVTTSDTPA
VTAEAPATEH ASTPAADTHT APAAPTIESV LPPPPPPAPP ALPPQPVPQV PQAPQPNDLS
RLAQDLQIRK AQVEAVVQLL DDGNTVPFMT RYRKERTGGL DEVQIRRIQD RITHLRELAN
KKQTVLRSIA NQGKLTDDLV QAILTAENLK RVDDLYLPFK AKKKTLASEA REKGLEPLAL
AIWTRDPAVA NLSEVLPGMV DPWKQLHTVD DVLTGVRHIL AEIVAERAEV RGPLRAFAWD
TALLVSTKTE TVPEGKGAEY RDYFDFKEPI HHIPPHRILA VNRGEREQII RIRIQWDATQ
AKDIALYHLP LADHPHRELL IPVVGDALDR LLMPSLEREV RREMTEHAQD HAVDIFARNL
RSLLMRAPLG GRKVLAIDPG VRTGCKVAVL DETGTLIEDG VVYPHAPQKK VAEAKLKLEQ
LIRKYGTAVI AIGNGTACRE TEQIVSDLIA EFEARRLNPA PAASPIEPVT ADTHAAGTAH
TDAPAHTAVS TLPAVESAGH TSLPVSPVEH LSTETPVHTG GVEMAGTVHI GTAEATVVSP
GLGAGETAVV VAPSGDTVES SVVHSPAVEA PAKAPPAPAI SLEGLPEPPA DIAYVIVNEA
GASDYSASPV AKDEFPTLDA TTRGTISIGR RLQDPLAELV KIDPQHVGVG LYQHDVRVKY
LKESVETVIE SCVNGVGVDL NTASVPLLRH VSGLNQLVAR ELVEYRKQHG PFTAREDLRK
VPQMGDTRFT QAAGFLKIRD GADPLDATWV HPESYPQARQ ILADLGFTSA DLGDKEKLSQ
LREKLKTTNP DEIAAKLDAG APTVRDIFDA IARPGRDPRE DRPQPIFRKG VLKLEDLKAG
MELKGEVLNV VDFGAFVDVG LKDSGLVHIS QMANRYIKSP YDVIAVGDVV SVWVMNVDPD
RRRVSLSMIA PGQERRPPER RPQGERQGGE RGERQGGERP RGERPPQQQG DRPPQGDRAP
QGPRQQGPRP PQGPGQGPGQ RPGFQPRPEG APQGDRPPQG DRPPQRQFGG QRPGGGGGRP
QQRGPGAPGW RTGPKPPPTP AAPPGTPAVG GDQASPAPGT TPPAPLPGKK PPRSRATPKI
SDQQKTGKEP VYSFAQLAAL LKAKDEPPPA TPVEPAPEAK AASAETSAPP ADVISPSEPP
SGQQGS
//
