ID A0A226MJ34_CALSU Unreviewed; 688 AA.
AC A0A226MJ34;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 13-SEP-2023, entry version 16.
DE RecName: Full=LNX2 protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=ASZ78_011286 {ECO:0000313|EMBL:OXB55297.1};
OS Callipepla squamata (Scaled quail).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae;
OC Callipepla.
OX NCBI_TaxID=9009 {ECO:0000313|EMBL:OXB55297.1, ECO:0000313|Proteomes:UP000198323};
RN [1] {ECO:0000313|EMBL:OXB55297.1, ECO:0000313|Proteomes:UP000198323}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Texas {ECO:0000313|EMBL:OXB55297.1,
RC ECO:0000313|Proteomes:UP000198323};
RC TISSUE=Leg muscle {ECO:0000313|EMBL:OXB55297.1};
RA Oldeschulte D.L., Halley Y.A., Bhattarai E.K., Brashear W.A., Hill J.,
RA Metz R.P., Johnson C.D., Rollins D., Peterson M.J., Bickhart D.M.,
RA Decker J.E., Seabury C.M.;
RT "Disparate Historic Effective Population Sizes Predicted by Modern Levels
RT of Genome Diversity for the Scaled Quail (Callipepla squamata) and the
RT Northern Bobwhite (Colinus virginianus): Inferences from First and Second
RT Generation Draft Genome Assemblies for Sympatric New World Quail.";
RL Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OXB55297.1}.
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DR EMBL; MCFN01000770; OXB55297.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A226MJ34; -.
DR STRING; 9009.A0A226MJ34; -.
DR Proteomes; UP000198323; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd16780; mRING-HC-C3HC3D_LNX2; 1.
DR CDD; cd00992; PDZ_signaling; 4.
DR Gene3D; 2.30.42.10; -; 4.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR036034; PDZ_sf.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR19964:SF33; LIGAND OF NUMB PROTEIN X 2; 1.
DR PANTHER; PTHR19964; MULTIPLE PDZ DOMAIN PROTEIN; 1.
DR Pfam; PF00595; PDZ; 4.
DR Pfam; PF13923; zf-C3HC4_2; 1.
DR SMART; SM00228; PDZ; 4.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF50156; PDZ domain-like; 4.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50106; PDZ; 4.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000198323};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 48..86
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 227..312
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 336..419
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 466..552
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 598..680
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT REGION 146..221
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 429..450
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 166..185
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 207..221
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 688 AA; 75670 MW; 82439E512F410B51 CRC64;
MGTTGDDMAS VEQNASLNPL CFECGQQHWT RENHLYNYQN EVDDDLVCHI CLQPLLQPLD
TPCGHTFCYK CLRNFLQEKD FCPLDRKRLH FKLCKKSSIL VHKLLDKLLV LCPFSSACQE
VMQRCDLAAH LKNRCPGASH RRVALERRKA SKLQAEAEGE SGPGGPEQPS SVSPDAEQSI
MPAEQSFTPA LPAWTDEPGI DNPPFEENTG ADTNQQPPTL PEGEITTIEI HRSNPYIELG
ISIVGGNETP LINIVIQEVY RDGIIARDGR LLAGDQILQV NSFDISNVSH NHARAVLSQP
CTVLHLTVLR ERRFGSRTHG HADTTTTTSS RDDSFQVTLH KRDSSEQLGI KLVRRTDEPG
VFILDLLEGG LAAQDGRLCS NDRVLAINGH DLKHGTPELA AQVIQASGER VNLIISRPIK
SQTVSIIRDT GTHNSNPHQH QSQQLVHSRP SSHKDLSQCV TCQEKHITVK KEPHESLGMT
VAGGRGSKSG ELPIFVTSVQ PHGCLARDGR IKRGDVLLNI NGIDLTNLSH SEAVAMLKAS
AASSVVALKA LEVQIVEEQP QANEEQLSTI SENEYDASWS PSWVMWLGLP SCLHSCHDVV
LRRSNLGSWG FSIVGGYEEN HTNQPFFIKT IVLGTPAYFD GRLKCGDMIV AVNGLSTVGM
SHSALVPMLK EQRNKVTLTV ICWPGSLI
//