ID A0A226MPU2_CALSU Unreviewed; 1312 AA.
AC A0A226MPU2;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=Zinc-hook domain-containing protein {ECO:0000259|PROSITE:PS51131};
GN ORFNames=ASZ78_000512 {ECO:0000313|EMBL:OXB57294.1};
OS Callipepla squamata (Scaled quail).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae;
OC Callipepla.
OX NCBI_TaxID=9009 {ECO:0000313|EMBL:OXB57294.1, ECO:0000313|Proteomes:UP000198323};
RN [1] {ECO:0000313|EMBL:OXB57294.1, ECO:0000313|Proteomes:UP000198323}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Texas {ECO:0000313|EMBL:OXB57294.1,
RC ECO:0000313|Proteomes:UP000198323};
RC TISSUE=Leg muscle {ECO:0000313|EMBL:OXB57294.1};
RA Oldeschulte D.L., Halley Y.A., Bhattarai E.K., Brashear W.A., Hill J.,
RA Metz R.P., Johnson C.D., Rollins D., Peterson M.J., Bickhart D.M.,
RA Decker J.E., Seabury C.M.;
RT "Disparate Historic Effective Population Sizes Predicted by Modern Levels
RT of Genome Diversity for the Scaled Quail (Callipepla squamata) and the
RT Northern Bobwhite (Colinus virginianus): Inferences from First and Second
RT Generation Draft Genome Assemblies for Sympatric New World Quail.";
RL Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- SUBCELLULAR LOCATION: Chromosome, telomere
CC {ECO:0000256|ARBA:ARBA00004574}.
CC -!- SIMILARITY: Belongs to the SMC family. RAD50 subfamily.
CC {ECO:0000256|ARBA:ARBA00009439}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OXB57294.1}.
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DR EMBL; MCFN01000558; OXB57294.1; -; Genomic_DNA.
DR STRING; 9009.A0A226MPU2; -.
DR Proteomes; UP000198323; Unassembled WGS sequence.
DR GO; GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.
DR GO; GO:0030870; C:Mre11 complex; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006302; P:double-strand break repair; IEA:InterPro.
DR GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0000723; P:telomere maintenance; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038729; Rad50/SbcC_AAA.
DR InterPro; IPR004584; Rad50_eukaryotes.
DR InterPro; IPR013134; Zn_hook_RAD50.
DR NCBIfam; TIGR00606; rad50; 1.
DR PANTHER; PTHR18867:SF12; DNA REPAIR PROTEIN RAD50; 1.
DR PANTHER; PTHR18867; RAD50; 1.
DR Pfam; PF13476; AAA_23; 1.
DR Pfam; PF04423; Rad50_zn_hook; 1.
DR Pfam; PF13558; SbcC_Walker_B; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF75712; Rad50 coiled-coil Zn hook; 1.
DR PROSITE; PS51131; ZN_HOOK; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Chromosome {ECO:0000256|ARBA:ARBA00022895};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00471}; Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000198323};
KW Telomere {ECO:0000256|ARBA:ARBA00022895};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00471}.
FT DOMAIN 635..734
FT /note="Zinc-hook"
FT /evidence="ECO:0000259|PROSITE:PS51131"
FT COILED 203..349
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 401..558
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 587..662
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 740..815
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 846..1070
FT /evidence="ECO:0000256|SAM:Coils"
FT BINDING 681
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00471"
FT BINDING 684
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00471"
SQ SEQUENCE 1312 AA; 153039 MW; E55FDBB089913264 CRC64;
MAKIEKMSIL GVRSFGVEDK DKQIITFFNP LTILVGPNGA GKTTIIECLK YISTGDFPPG
TKGNSFVHDP KVANETDVRA QIRLQFRDVN GELVAVQRSM VCTQKSKKTE FKTLEGVITR
TKHGEKVSLS SKCAEIDREM ISALGVSKSV LNNVIFCHQE ESNWPLSEGK ALKQKFDEIF
SATRYIKALE TLRQVRLKQG LKVKECQTEL KYLKQNKEKA QEIQDNLANR EAQLSASKEN
IKSIENQLDP LKCSLAAVEK NLMKVMSLDN EVKALESRRR QMEKDNQDLQ QKMEKVFQGT
DDQLRDRYQN HQRTVKEKEK RLSDCKRELD RASKECQRFN SEKSELLIER GRLQLQADRH
QEHIRARDSL IQSLSAQLEL DGFEQAPFND RQIAAFHELL NERQKSDMEA ANQLMREFAQ
KEAMKQKQID EIRDRKTGLE RTIDLKSDIL NKRQAELKNV KYELRQLEGS SDRIVELDQE
IVKTEHELEK AERNSNVETL EQEVQTLQRE KISLDKVLRK LDQEMEQLNL HTTTITQMEM
LKKDKADKEE QIRKVKSRHS EELTLLLGYF PNKKQLEDWL HGKSTEINET RNRHALLNKQ
LASAEQQKNY ISAELRKKEE QLSSYEAKLF DVCGSQDFDS NLNKLQDEIE KSSKQRAVLA
GATAVYSQFI TQLTEESQPC CPVCQRGFET EAALQDVISD LQSKLRLAPD KLKSTESELK
RREKKRDEMM GLKPVRQSVV ELQERDIPDL RNRLQAVNRE FARLKGEIEE QETLLQTVLS
EKEGANACLQ DITLMERYQT DIRDVERKIA QQEAKLLGVD LSRSVLQVSQ EKQEKKHLWD
TVTSKIELNQ KIKQDQQNQI QELKSAVNEL RAEKLQISSS MQRRQQLEEQ TVELTTEVQS
LHREIKEAKE QVFPLDATLE KLQQDKEDLI NKRTASSKDI QEKMNGIKEK AKDINKYMKE
IENYVRQGKE EYKKQKECEL DEVNSQLVAC EKQKEKISKE MEIIRQDIDT QKIQERWLED
NLTLRKRNEE LKEVEDNIKQ LVREMGEMKV PQLKNEQKHL EEKIEALKRN HHVALGRQRG
FEEEIVRFKK ELRESQFRDA EEKHREMMIV MRTTELVNKD LDIYYKALDK AIMTFHSMKM
QEINKIIRDL WRSTYRGQDI EYIEIRSDAD ENVSASDKRR SYNYRVVMIK GDTALDMRGR
YSAGQKVLAS LIIRLALAET FCLNCGILAL DEPTTNLDRE NIESLAHALV EIIKSRSRQR
NFQLLVITHD EDFVELLGRS EYVETFYRIR KNIDQCSEIM KCSVSSLGSY VH
//