ID A0A226NDJ3_CALSU Unreviewed; 276 AA.
AC A0A226NDJ3;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 27-MAR-2024, entry version 14.
DE RecName: Full=DUF5050 domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=ASZ78_016631 {ECO:0000313|EMBL:OXB65567.1};
OS Callipepla squamata (Scaled quail).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae;
OC Callipepla.
OX NCBI_TaxID=9009 {ECO:0000313|EMBL:OXB65567.1, ECO:0000313|Proteomes:UP000198323};
RN [1] {ECO:0000313|EMBL:OXB65567.1, ECO:0000313|Proteomes:UP000198323}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Texas {ECO:0000313|EMBL:OXB65567.1,
RC ECO:0000313|Proteomes:UP000198323};
RC TISSUE=Leg muscle {ECO:0000313|EMBL:OXB65567.1};
RA Oldeschulte D.L., Halley Y.A., Bhattarai E.K., Brashear W.A., Hill J.,
RA Metz R.P., Johnson C.D., Rollins D., Peterson M.J., Bickhart D.M.,
RA Decker J.E., Seabury C.M.;
RT "Disparate Historic Effective Population Sizes Predicted by Modern Levels
RT of Genome Diversity for the Scaled Quail (Callipepla squamata) and the
RT Northern Bobwhite (Colinus virginianus): Inferences from First and Second
RT Generation Draft Genome Assemblies for Sympatric New World Quail.";
RL Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OXB65567.1}.
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DR EMBL; MCFN01000089; OXB65567.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A226NDJ3; -.
DR STRING; 9009.A0A226NDJ3; -.
DR Proteomes; UP000198323; Unassembled WGS sequence.
DR Gene3D; 2.120.10.30; TolB, C-terminal domain; 2.
DR InterPro; IPR011042; 6-blade_b-propeller_TolB-like.
DR InterPro; IPR000033; LDLR_classB_rpt.
DR PANTHER; PTHR46513:SF40; LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 6; 1.
DR PANTHER; PTHR46513; VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED; 1.
DR Pfam; PF00058; Ldl_recept_b; 3.
DR SMART; SM00135; LY; 5.
DR SUPFAM; SSF63825; YWTD domain; 2.
DR PROSITE; PS51120; LDLRB; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000198323}.
FT REPEAT 112..154
FT /note="LDL-receptor class B"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00461"
FT REPEAT 155..197
FT /note="LDL-receptor class B"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00461"
FT REPEAT 198..241
FT /note="LDL-receptor class B"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00461"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:OXB65567.1"
SQ SEQUENCE 276 AA; 31438 MW; 80B929173227A6D7 CRC64;
QAVVKGSLPH PFALTLFGDT LYWTDWNTHS ILACSKYSGE DLREIHSNIF SPMDIHAFSQ
KRQPNGATEL LLLARRTDLR RISLDTPDFT DIVLPLEDIR HAIAIDFDPL EGYIYWTDDE
VRAIRRSFVD GSGSQFVVTA QIAHPDGIAV DWVARNLYWT DTGTDRIEVT RLNGTMRKIL
ISEDLEEPRA IVLDPMVGYM YWTDWGEIPK IERAALDGSD RIVLVNTSLG WPNGLALDYS
ESKIYWGDAK TDKIEVCNCT YIFNSLELQN VVTLFF
//