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Database: UniProt
Entry: A0A226NKG3_CALSU
LinkDB: A0A226NKG3_CALSU
Original site: A0A226NKG3_CALSU 
ID   A0A226NKG3_CALSU        Unreviewed;      1898 AA.
AC   A0A226NKG3;
DT   25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT   25-OCT-2017, sequence version 1.
DT   31-JUL-2019, entry version 12.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:OXB68004.1};
GN   ORFNames=ASZ78_014689 {ECO:0000313|EMBL:OXB68004.1};
OS   Callipepla squamata (Scaled quail).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
OC   Odontophoridae; Callipepla.
OX   NCBI_TaxID=9009 {ECO:0000313|EMBL:OXB68004.1, ECO:0000313|Proteomes:UP000198323};
RN   [1] {ECO:0000313|EMBL:OXB68004.1, ECO:0000313|Proteomes:UP000198323}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Texas {ECO:0000313|EMBL:OXB68004.1,
RC   ECO:0000313|Proteomes:UP000198323};
RC   TISSUE=Leg muscle {ECO:0000313|EMBL:OXB68004.1};
RA   Oldeschulte D.L., Halley Y.A., Bhattarai E.K., Brashear W.A., Hill J.,
RA   Metz R.P., Johnson C.D., Rollins D., Peterson M.J., Bickhart D.M.,
RA   Decker J.E., Seabury C.M.;
RT   "Disparate Historic Effective Population Sizes Predicted by Modern
RT   Levels of Genome Diversity for the Scaled Quail (Callipepla squamata)
RT   and the Northern Bobwhite (Colinus virginianus): Inferences from First
RT   and Second Generation Draft Genome Assemblies for Sympatric New World
RT   Quail.";
RL   Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the helicase family. Dicer subfamily.
CC       {ECO:0000256|PROSITE-ProRule:PRU00657}.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:OXB68004.1}.
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DR   EMBL; MCFN01000025; OXB68004.1; -; Genomic_DNA.
DR   Proteomes; UP000198323; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd00048; DSRM; 1.
DR   CDD; cd00593; RIBOc; 2.
DR   Gene3D; 1.10.1520.10; -; 1.
DR   Gene3D; 3.30.160.380; -; 1.
DR   InterPro; IPR038248; Dicer_dimer_sf.
DR   InterPro; IPR005034; Dicer_dimerisation_dom.
DR   InterPro; IPR014720; dsRBD_dom.
DR   InterPro; IPR006935; Helicase/UvrB_N.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR003100; PAZ_dom.
DR   InterPro; IPR036085; PAZ_dom_sf.
DR   InterPro; IPR000999; RNase_III_dom.
DR   InterPro; IPR036389; RNase_III_sf.
DR   Pfam; PF03368; Dicer_dimer; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF02170; PAZ; 1.
DR   Pfam; PF04851; ResIII; 1.
DR   Pfam; PF00636; Ribonuclease_3; 2.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00358; DSRM; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00949; PAZ; 1.
DR   SMART; SM00535; RIBOc; 2.
DR   SUPFAM; SSF101690; SSF101690; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   SUPFAM; SSF69065; SSF69065; 2.
DR   PROSITE; PS51327; DICER_DSRBF; 1.
DR   PROSITE; PS50137; DS_RBD; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50821; PAZ; 1.
DR   PROSITE; PS00517; RNASE_3_1; 1.
DR   PROSITE; PS50142; RNASE_3_2; 2.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000198323};
KW   Reference proteome {ECO:0000313|Proteomes:UP000198323};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00266};
KW   RNA-mediated gene silencing {ECO:0000256|SAAS:SAAS00703041}.
FT   DOMAIN       28    204       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      410    579       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
FT   DOMAIN      607    699       Dicer dsRNA-binding fold.
FT                                {ECO:0000259|PROSITE:PS51327}.
FT   DOMAIN      868   1019       PAZ. {ECO:0000259|PROSITE:PS50821}.
FT   DOMAIN     1246   1350       RNase III. {ECO:0000259|PROSITE:PS50142}.
FT   DOMAIN     1642   1800       RNase III. {ECO:0000259|PROSITE:PS50142}.
FT   DOMAIN     1825   1890       DRBM. {ECO:0000259|PROSITE:PS50137}.
FT   REGION      386    410       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   REGION      704    723       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   REGION     1759   1778       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COMPBIAS    389    404       Acidic. {ECO:0000256|SAM:MobiDB-lite}.
SQ   SEQUENCE   1898 AA;  216129 MW;  D999C47EEB9FE02E CRC64;
     MGPFFGLPWQ QEAIHDNIYT PRKYQVELLE AALDHNTIVC LNTGSGKTFI AVLLTKELSY
     QIRGDFNKNG KRTVFLVNSA NQVAQQVSAV RTHSDLKVGE YSSLEVTESW TKEKWSQEFS
     KHQVLVMTCH VALTVLRNEY LSLSNINLLV FDECHLAIQD HPYREIMKIC EDYPSCPRIL
     GLTASILNGK CDPAELEEKI KKLEKILKSN AETATDLVVL DRYTSQPCEI VVDCGPYTDK
     SGLYGRLLSE LDEALHFLND CNISVHSKER DSTLISKQIL SDCRAVLVVL GPWCADKVAG
     MMVRELQKYI KHEQEELHRK FLLFTDTFLR KIHALCEEHF SPASLDLKFV TPKVIKLLEI
     LRKYKPYERQ QFESVEWYNN RNQDNYVSWS DSEDDDEDEE IEEKEKPETN FPSPFTNILC
     GIIFVERRYT AVVLNRLIKE AGKQDPELAY ISSNFITGHG IGKNQPRNKQ MEVEFRKQEE
     VLRKFRAHET NLLIATSIVE EGVDIPKCNL VVRFDLPTEY RSYVQSKGRA RAPISNYIML
     ADTDKIKSFE EDLKTYKAIE KILRNKCSKS VDTSETETEP IVDDDDVFPP YVLRPDENSP
     RVTINTAIGH INRYCARLPS DPFTHLAPKC KTRELPDHTF YSTLYLPINS PLRASIVGPP
     MSCARLAERV VALICCEKLH KIGELDDHLM PVGKETVKYE EELDLHDEEE TSVPGRPGST
     KRRQCYPKAI PECLRDSYPK PDQPCYLYVI GMVLTTPLPD ELNFRRRKLY PPEDTTRCFG
     ILTAKPIPQI PHFPVYTRSG EVTISIELKK SGFTLSLQML ELITRLHQYI FSHILRLEKP
     ALEFKPTEAD SAYCVLPLNV VDDSSTLDID FKFMEDIEKS EARTGIPSTQ YTKEMPFIFK
     LEDYQDAVII PRYRNFDQPH RFYVADVYTD LTPLSKFPSP EYETFAEYYK TKYNLDLTNL
     NQPLLDVDHT SSRLNLLTPR HLNQKGKALP LSSAEKRKAK WESLQNKQIL VPELCAIHPI
     PASLWRKAVC LPSILYRLHC LLTAEELRAQ TATDAGVGVK SLPADFRYPN LDFGWKKSID
     SKSFISIPSS SLVENENYCK HSTIVVPENA AHQGANRTSS AEKHDQMSVS YRALLDESPS
     KLQIDVSAEL AAINGVSYNK NLANGNCDLV NRDFCQGNQL NYCRQEIPVQ PTTSYPIQNL
     YSSENQPKPS NECTLLSNKY LDGNANRSTS DGCPKMAVTT STSTALNPLK DKVDSEKNSS
     SGYSSKTLGP NPGLILQALT LSNASDGFNL ERLEMLGDSF LKHAITTYLF CTYPDAHEGR
     LSYMRSKKVS NCNLYRLGKK KGLPSRMVVS IFDPPVNWLP PGYIVNQDKS NTDKWEKDET
     TKDNLLANGK LDYDDDDEED EDLMWRLPKE ETDFEDDFLE YDQEHIKFID SMLMGSGAFV
     KKISLSHFST TDSNYEWKAP KKSSLGNVQF SSDFDDFDYS SWDAMCYLDP SKAVEEDDFV
     VGFWNPSEEN CGVDAGKQSI SYDLHTEQCI ADKSIADCVE ALLGCYLTSC GERAAQLFLC
     SLGLKVLPVI KKTDWESTLC AAGENCNSEQ KNLSPNSIPA CVVNSEPSLY KDLEYGCLKI
     PPRCMFDHPD AEKTLNHLIS GFENFEKKIN YCFKNKAYLL QAFTHASYHY NTITDCYQRL
     EFLGDAILDY LITKHLYEDP RQHSPGVLTD LRSALVNNTI FASLAVKYDY HKYFKAVSPE
     LFHVIDDFVQ FQMEKNEMQG MDSELRRSEE DEEKEEDIEV PKAMGDIFES LAGAIYMDSG
     MSLEMVWQVY YPMMRPLIEK FSANVPRSPV RELLEMEPET AKFSPAERTY DGKVRVTVEV
     VGKGKFKGVG RSYRIAKSAA ARRALRSLKA NQPQVPNS
//
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