ID A0A233HR91_9VIBR Unreviewed; 776 AA.
AC A0A233HR91;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE SubName: Full=RNA-binding transcriptional accessory protein {ECO:0000313|EMBL:OXX63959.1};
GN ORFNames=B9J89_05865 {ECO:0000313|EMBL:OXX63959.1};
OS Vibrio sp. V15_P4S5T153.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=1938669 {ECO:0000313|EMBL:OXX63959.1, ECO:0000313|Proteomes:UP000215241};
RN [1] {ECO:0000313|EMBL:OXX63959.1, ECO:0000313|Proteomes:UP000215241}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=V15_P4S5T153 {ECO:0000313|EMBL:OXX63959.1,
RC ECO:0000313|Proteomes:UP000215241};
RA Vazquez-Rosas-Landa M.;
RT "High clonality and local adaptation shapes Vibrionaceae linages within an
RT endangered oasis.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OXX63959.1}.
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DR EMBL; NDIJ01000004; OXX63959.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A233HR91; -.
DR Proteomes; UP000215241; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
FT DOMAIN 651..720
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 719..776
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 724..756
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 776 AA; 85355 MW; C14CE20DE7AA553C CRC64;
MSQAICKLIA QELNVRLEQV TATVTLIDDG NTVPFIARYR KEVTGGLDDT QLRTLDSRLS
YLRELDDRRQ TILKSIQEQG KLSAELAQEI NQADSKTRLE DLYLPYKPKR RTKGQIAIEA
GLEPLADKLW NEAQTDPETE AAHYVNTEKG ISDIKAALDG ARAIIMERIA EDANLLDKVR
RHLTRSAELV SRVVEGKEQA GEKFKDYFAH NETLSKVPSH RALAMLRGRN EGFLSLSMNA
DPEQEEGVRQ SYCETLIAQH YGIHLSSAPA DGWRKQVISW AWRIKVSMHM ETELMGTMKE
RAEIEAIEVF ATNLKDLLMA APAGPRATLG LDPGLRTGSK IAVVDATGKV LATETIYPHQ
PHNQHDKSAK IVEQLVRQFN VDLIAIGNGT ASRETDTFVA DVIKRGNLKV QKIIVSEAGA
SVYSASELAA KEFPNMDVSL RGAVSIARRL QDPLAELVKI DPKSIGVGQY QHDVSQSMLA
KRLDAIVEDC VNAVGVDVNT ASAALLTRVA GLSNALAQNI VDYRDENGRF ASRATLKKVA
RLGPKAFEQC AGFLRIMDGK NPLDASSVHP EAYPVVKAIA EKNSKEIKAL IGNSEFLRNL
HAVDYTDEHF GLPTVTDIIK ELDKPGRDPR PEFKTATFAD GVTEMKDLEI GMILEGVVSN
VANFGAFVDI GVHQDGLVHI SALTDRFIAD PREVVKAGDI VKVKVMEVDV QRKRIALSMR
LNDEPGQDNR SQRSGSTSGN TRSHQNGGQP QRRREEPQQN AAMGGAFAAA FAKAKK
//