ID A0A238W5X0_9FLAO Unreviewed; 412 AA.
AC A0A238W5X0;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE SubName: Full=ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:SNR41817.1};
GN ORFNames=SAMN06265371_102449 {ECO:0000313|EMBL:SNR41817.1};
OS Lutibacter agarilyticus.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Lutibacter.
OX NCBI_TaxID=1109740 {ECO:0000313|EMBL:SNR41817.1, ECO:0000313|Proteomes:UP000198384};
RN [1] {ECO:0000313|EMBL:SNR41817.1, ECO:0000313|Proteomes:UP000198384}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 29150 {ECO:0000313|EMBL:SNR41817.1,
RC ECO:0000313|Proteomes:UP000198384};
RA Kim H.J., Triplett B.A.;
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FZNT01000002; SNR41817.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A238W5X0; -.
DR OrthoDB; 9785240at2; -.
DR Proteomes; UP000198384; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR47959:SF13; ATP-DEPENDENT RNA HELICASE RHLE; 1.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:SNR41817.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000198384}.
FT DOMAIN 1..29
FT /note="DEAD-box RNA helicase Q"
FT /evidence="ECO:0000259|PROSITE:PS51195"
FT DOMAIN 32..208
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 219..382
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 379..412
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 1..29
FT /note="Q motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00552"
FT COMPBIAS 387..412
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 412 AA; 46215 MW; 45F161549EBB9195 CRC64;
MQFKDLQLNK SILKAIAEQN YDAPTPVQQQ TIPLVLAKKD VITTAQTGTG KTAAFALPIL
QMLFNKQDAG KKGKKLRALI VSPTRELALQ IQESFKVYGK YSNLKSTVVY GGTSIEPQKD
LLKKGVDILV ATPGRLLDLH KQDCLNLDYI ETLVLDEADL MLDMGFIDDV RKIERLCPQE
KQVLLFSATM PNKVVNLANT ILNEPETVNA TPSSSTAQNV QQLLFYVHKQ HKMELCLYLL
RNTIEGNILI FRRTKMGIAK LEKMLKSNGY KVNSIHGDKT QDDREDALEK FKDGSINILI
ATDVAARGID INNLDAVINF DIPNISETYV HRIGRTGRAG NSGVAYSFCS ADEKPYIADI
HKLINTTIPV MDEHPYVLDP KAKKEVHRTP GKSKHRPGRK SEASKKNKKR WY
//
