ID A0A239FN90_9SPHN Unreviewed; 240 AA.
AC A0A239FN90;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:SNS58088.1};
GN ORFNames=SAMN06295955_102157 {ECO:0000313|EMBL:SNS58088.1};
OS Sphingopyxis indica.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingopyxis.
OX NCBI_TaxID=436663 {ECO:0000313|EMBL:SNS58088.1, ECO:0000313|Proteomes:UP000198339};
RN [1] {ECO:0000313|EMBL:SNS58088.1, ECO:0000313|Proteomes:UP000198339}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DS15 {ECO:0000313|EMBL:SNS58088.1,
RC ECO:0000313|Proteomes:UP000198339};
RA Kim H.J., Triplett B.A.;
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
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DR EMBL; FZPA01000002; SNS58088.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A239FN90; -.
DR Proteomes; UP000198339; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF46; ECF RNA POLYMERASE SIGMA FACTOR SIGG; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000198339}.
FT DOMAIN 74..141
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 170..222
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
SQ SEQUENCE 240 AA; 26358 MW; 440FF14FCD130996 CRC64;
MPARKSAVHR GRPSAWALLS VCGSPVSLQI SLFAREDAPA CDAPAAPAPL CDSDDLDALM
ARVARGDADA FGALVDRYSA RLYRLAWRLL GDAQEAEDAV QDCFARLWQG APGWQARGGG
LATWLHRVTV NRCLDRLRRY RTVADEEAVA AVEDISPGPE RRLAMHRLQN AIEAALHALP
HRHRAALVLC YLEGFSNALA AEMLGLNLKA MESLLFRARR SLRERLEQMG VAVEDLELLA
//
