ID A0A239J2M6_9SPHN Unreviewed; 589 AA.
AC A0A239J2M6;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=ATP-dependent RNA helicase DeaD {ECO:0000313|EMBL:SNT00087.1};
GN ORFNames=SAMN06295955_10950 {ECO:0000313|EMBL:SNT00087.1};
OS Sphingopyxis indica.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingopyxis.
OX NCBI_TaxID=436663 {ECO:0000313|EMBL:SNT00087.1, ECO:0000313|Proteomes:UP000198339};
RN [1] {ECO:0000313|EMBL:SNT00087.1, ECO:0000313|Proteomes:UP000198339}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DS15 {ECO:0000313|EMBL:SNT00087.1,
RC ECO:0000313|Proteomes:UP000198339};
RA Kim H.J., Triplett B.A.;
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC {ECO:0000256|RuleBase:RU000492}.
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DR EMBL; FZPA01000009; SNT00087.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A239J2M6; -.
DR OrthoDB; 9805696at2; -.
DR Proteomes; UP000198339; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProt.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd12252; RRM_DbpA; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR005580; DbpA/CsdA_RNA-bd_dom.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR PANTHER; PTHR47959:SF19; ATP-DEPENDENT RNA HELICASE DBPA; 1.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR Pfam; PF03880; DbpA; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU000492};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000256|RuleBase:RU000492};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU000492};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU000492};
KW Reference proteome {ECO:0000313|Proteomes:UP000198339}.
FT DOMAIN 30..205
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 228..407
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 423..455
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 520..589
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 436..455
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 544..565
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 589 AA; 64099 MW; F93ACBE2C91430A1 CRC64;
MTFDHLSPVL SDALTARGYE ALTPVQAQVT EAEAHGRDLL VSAQTGSGKT VAFGLAMADE
LLADGRLPFA SAPLALIVAP TRELALQVSR ELGWLYAQAG ARIATCVGGM DASRERRALN
QGVHIVVGTP GRLRDHLERG ALDLAALRVA VLDEADEMLD MGFREDLEEI LDATPATRRT
LLFSATIPKP IAQLAKRYQK DALRISTVGD TRGHGDIAYQ VVTVAPADIE GAVINLLRLH
EADTAMLFCA TRDNVRRLHA RLVNRGFAAV ALSGEHSQNE RNHALQALRD RRARVCVATD
VAARGIDLPS LSLVVHVEIP RDAETLQHRS GRTGRAGKKG TAVLIVPYPR RRRVDAMLRG
AKIEAQWMPA PTAADVRARD QERLIEALLA PVEHEADDLE LAQRLLAERS PEDIAASLVR
AHRATMPPPE ELIDNGPPAR GERGERPDRT PRREGFDDSV WFRLDVGRRQ NADPRWILPL
LCRRGHVTKN EIGAIRIGPN ETLFNIPLAI ADRFAEAVER TAGRDGGEDD SGVTITPAPE
GSSYPPRRDK RPFKGGPRGD GPRKPHGQGK PGGGFKAKPY AKGKKGRQG
//
