ID A0A239L3F6_9SPHN Unreviewed; 658 AA.
AC A0A239L3F6;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE SubName: Full=Type IV secretion system protein VirD4 {ECO:0000313|EMBL:SNT24229.1};
GN ORFNames=SAMN06295955_11850 {ECO:0000313|EMBL:SNT24229.1};
OS Sphingopyxis indica.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingopyxis.
OX NCBI_TaxID=436663 {ECO:0000313|EMBL:SNT24229.1, ECO:0000313|Proteomes:UP000198339};
RN [1] {ECO:0000313|EMBL:SNT24229.1, ECO:0000313|Proteomes:UP000198339}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DS15 {ECO:0000313|EMBL:SNT24229.1,
RC ECO:0000313|Proteomes:UP000198339};
RA Kim H.J., Triplett B.A.;
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the VirD4/TraG family.
CC {ECO:0000256|ARBA:ARBA00008806}.
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DR EMBL; FZPA01000018; SNT24229.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A239L3F6; -.
DR OrthoDB; 9759295at2; -.
DR Proteomes; UP000198339; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003688; TraG/VirD4.
DR PANTHER; PTHR37937; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR PANTHER; PTHR37937:SF1; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR Pfam; PF02534; T4SS-DNA_transf; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000198339};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 71..96
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 549..658
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 582..597
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 607..627
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 640..658
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 658 AA; 72964 MW; 5AE2C4C26B903AAD CRC64;
MSATKILWGQ ILVVLAIILV AVWTATQWTA AALAYQPQLG APWFFLGDWP VYPPPAFFWW
WFSFDAYAPD IFARGGIIAA SGGILSIVAA IAMSVWRARE ARNAQTYGSA RWATTKEVRR
SGLLGEDGVM LGQFERAYLR HDGPEHVLCF APTRSGKGVG LVVPTLLTWP GSCIIHDIKG
ENWQLTAGFR SRFGPALLFD PTNPASAAYN PLLEVRKGEW EVRDVQNVAD VLVDPEGSLE
KRNHWEKTSH SLLVGAILHV LYAEADKTLA GVANFLSDPA RPIESTLRRM MLTPHLGEAG
VHPVIASAAR ELLNKSENER SGVLSTAMSF LGLYRDPVVA RVTRQCDWRI ADLVDGKHPA
SLFLVVPPSD ISRTKPLIRL ILNQIGRRLT EDLNSNGNRH RVLLMLDEFP ALGRLDFFEQ
ALAFVAGYGL KAFLIAQSLN QIEKAYGPNN AILDNCHVRV SFATNDERTA KRLSDALGTA
TELRAMKNYA GHRLSPWLGH LMVSRSETAR QLLTPGEIMQ FPPEDEIVMI AGSPPIRARK
ARYFEDRRFS ERVLPPPQPK SSAPKPNDWT GLEPIKPPAP VDQPEEARKR PKPPDAATAL
RREPGVPAQD EAAHEPRPAR REFEFDDEQP ADTDAAVTRR MQQVARQTSM DPGDGIQL
//