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Database: UniProt
Entry: A0A239PYZ1_9PROT
LinkDB: A0A239PYZ1_9PROT
Original site: A0A239PYZ1_9PROT 
ID   A0A239PYZ1_9PROT        Unreviewed;       569 AA.
AC   A0A239PYZ1;
DT   22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2017, sequence version 1.
DT   24-JAN-2024, entry version 19.
DE   RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN   ORFNames=SAMN06297382_2709 {ECO:0000313|EMBL:SNT75380.1};
OS   Amphiplicatus metriothermophilus.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Parvularculales;
OC   Parvularculaceae; Amphiplicatus.
OX   NCBI_TaxID=1519374 {ECO:0000313|EMBL:SNT75380.1, ECO:0000313|Proteomes:UP000198346};
RN   [1] {ECO:0000313|EMBL:SNT75380.1, ECO:0000313|Proteomes:UP000198346}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CGMCC 1.12710 {ECO:0000313|EMBL:SNT75380.1,
RC   ECO:0000313|Proteomes:UP000198346};
RA   Sun Z.S., Albrecht U., Echele G., Lee C.C.;
RL   Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC       point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC       purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC       ECO:0000256|PIRNR:PIRNR002111}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC       {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
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DR   EMBL; FZQA01000008; SNT75380.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A239PYZ1; -.
DR   OrthoDB; 9804077at2; -.
DR   Proteomes; UP000198346; Unassembled WGS sequence.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR   CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR000110; Ribosomal_bS1.
DR   InterPro; IPR035104; Ribosomal_protein_S1-like.
DR   InterPro; IPR003029; S1_domain.
DR   NCBIfam; TIGR00717; rpsA; 1.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR   Pfam; PF00575; S1; 6.
DR   PIRSF; PIRSF002111; RpsA; 1.
DR   PRINTS; PR00681; RIBOSOMALS1.
DR   SMART; SM00316; S1; 6.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR   PROSITE; PS50126; S1; 6.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000198346};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW   Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW   ECO:0000313|EMBL:SNT75380.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT   DOMAIN          30..96
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          114..180
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          201..270
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          287..357
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          374..444
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          455..531
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
SQ   SEQUENCE   569 AA;  62916 MW;  F7F273D1DD726F9D CRC64;
     MSATETLNPS RDAFAEMLEA SLVDRKEFEE TVVKGVVTAI EKDAAVVDIG LKTEGRVPLK
     EFAQAGKPAD LKVGDEVEVY VERVENANGE AVLSREKARR EEAWERLEKM FDKGERVEGV
     IFNRVKGGFT VDLGGAVAFL PGSQVDIRPV RDAGPLMNIP QPFRILKMDK RRGNIVVSRR
     AVLEEDRAEH RQEVVREMNE GDVREGVVKN ITDYGAFVEL APGVDGLLHV TDMSWSRVNH
     PSEVLGVNDT VKVKIIKINP ETHRISLGIK QLQPDPWEGV AAKYPVGAKF RGRVTNITDY
     GAFVELEEGI EGLVHVSEMS WVKKNVHPGK VVSTSQEVEV MVLEVDENKR RISLGLKQCL
     DNPWERFAED HPIGSIIEGE IKNITEFGLF VGLTEEMDGM VHLSDLDWNR PGEEAIKDYR
     KGQVVKAKVL DVDPEKERIS LGIKQVGSDP LDSVGEIRKG DDVTCTVTAI ETGGIEVQVG
     GEGGPKAFIR KSDLSKDRAE QRPDRFAVGD KVDARVISFD RVTRRIGLSI KAREVAEEKE
     AVEQYGSADA GASLGDILGA ALKEREKKE
//
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