ID A0A246FPQ9_9BACT Unreviewed; 830 AA.
AC A0A246FPQ9;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE SubName: Full=Penicillin acylase family protein {ECO:0000313|EMBL:OWP64735.1};
GN ORFNames=CDA63_02960 {ECO:0000313|EMBL:OWP64735.1};
OS Hymenobacter amundsenii.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae;
OC Hymenobacter.
OX NCBI_TaxID=2006685 {ECO:0000313|EMBL:OWP64735.1, ECO:0000313|Proteomes:UP000197277};
RN [1] {ECO:0000313|EMBL:OWP64735.1, ECO:0000313|Proteomes:UP000197277}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCM 8682 {ECO:0000313|EMBL:OWP64735.1,
RC ECO:0000313|Proteomes:UP000197277};
RA Sedlacek I., Kralova S., Pantucek R., Svec P., Holochova P., Stankova E.,
RA Vrbovska V., Busse H.-J.;
RT "Hymenobacter amundsenii sp. nov. isolated from regoliths in Antarctica.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Ca(2+); Xref=ChEBI:CHEBI:29108;
CC Evidence={ECO:0000256|PIRSR:PIRSR001227-2};
CC Note=Binds 1 Ca(2+) ion per dimer. {ECO:0000256|PIRSR:PIRSR001227-2};
CC -!- SIMILARITY: Belongs to the peptidase S45 family.
CC {ECO:0000256|ARBA:ARBA00006586}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWP64735.1}.
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DR EMBL; NIRR01000002; OWP64735.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A246FPQ9; -.
DR OrthoDB; 9759796at2; -.
DR Proteomes; UP000197277; Unassembled WGS sequence.
DR GO; GO:0016811; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0017000; P:antibiotic biosynthetic process; IEA:InterPro.
DR CDD; cd03747; Ntn_PGA_like; 1.
DR Gene3D; 1.10.1400.10; -; 1.
DR Gene3D; 2.30.120.10; -; 1.
DR Gene3D; 3.60.20.10; Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1; 1.
DR Gene3D; 1.10.439.10; Penicillin Amidohydrolase, domain 1; 1.
DR InterPro; IPR029055; Ntn_hydrolases_N.
DR InterPro; IPR014395; Pen/GL7ACA/AHL_acylase.
DR InterPro; IPR043147; Penicillin_amidase_A-knob.
DR InterPro; IPR023343; Penicillin_amidase_dom1.
DR InterPro; IPR043146; Penicillin_amidase_N_B-knob.
DR InterPro; IPR002692; S45.
DR PANTHER; PTHR34218:SF4; ACYL-HOMOSERINE LACTONE ACYLASE QUIP; 1.
DR PANTHER; PTHR34218; PEPTIDASE S45 PENICILLIN AMIDASE; 1.
DR Pfam; PF01804; Penicil_amidase; 1.
DR PIRSF; PIRSF001227; Pen_acylase; 1.
DR SUPFAM; SSF56235; N-terminal nucleophile aminohydrolases (Ntn hydrolases); 1.
PE 3: Inferred from homology;
KW Calcium {ECO:0000256|PIRSR:PIRSR001227-2};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|PIRSR:PIRSR001227-2};
KW Zymogen {ECO:0000256|ARBA:ARBA00023145}.
FT ACT_SITE 278
FT /note="Nucleophile"
FT /evidence="ECO:0000256|PIRSR:PIRSR001227-1"
FT BINDING 350
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000256|PIRSR:PIRSR001227-2"
FT BINDING 353
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000256|PIRSR:PIRSR001227-2"
SQ SEQUENCE 830 AA; 93115 MW; 4F96E93068A49002 CRC64;
MLRYVKAVLA LLTTVILAWV LNTKQGDVPP VARLLSPYQG FWRNGETATD FPAQQTLHLP
GLHQTVRVRF DDRRVPHVFA LNDHDLYYAQ GYLTARDRLW QMEFMTRVAA GRISEVVGPK
ALEYDRFQRR MGLPLGAANS LREMLKNDTT RLVLESYSAG VNAYISQLRP ADYPFEYKLL
DYAPEPWQPL KCALLLKLMA WDLSGRSDDL RLSNILSKYG SEVTRDLFPD YPVREDPVVP
VGAPLAFTPL PVPAAPPLFG AAVSGLVPER EPDAELGSNN FAVAGSRSAS GLPLLANDPH
LQLNLPSIWY QIQLSAPGQN VYGVTIPGAP AIIIGFNESV AWGVTNVGGD VLDWYQLKFR
DSTRREYWHD GRWKPVRRVV EHVAVRGRPD VLDTVLYTHH GPVVYDHDEK PFNAQTPVRH
ALRWTAHEGA NEVLAFVKLN HARNYADYDQ ALRTYASPAQ NFIFASSQND IAIRPNGRFP
LKYPDQGKFI LDGSDARQDW QGWIPMSQTP RVKNPERGFL SSANQHSAGP DYPYYLGWDY
APWDRAHRIN EQLATMHHAT ADTLRRLQND DLGINAQTML PWMLAMVQAG GTPVSQTGER
GGSLQTAVLQ TLQGWNYHYT AKAVAATVFE LWYQELVRRL WEDDFSRAAT GLEMRYPARD
RTNQLLLNQS GNPAASFQGA SPWIDDRRTP EKENVHDLLT ASLQFTVDSL TRKFGPLGPG
WAWANQKSTD INHLAQLPGF GHQDIVCPGS PGTVNATGAR NGPSWRMVVA LGPQVKAYGI
FPGGQSGNPA SRYYDDMLES WRTGQLDELV FLRAADENHP RLQAAWRLEQ
//