ID A0A246JDM4_9SPHN Unreviewed; 564 AA.
AC A0A246JDM4;
DT 25-OCT-2017, integrated into UniProtKB/TrEMBL.
DT 25-OCT-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Recombinase family protein {ECO:0000313|EMBL:OWQ90597.1};
GN ORFNames=CDQ91_20295 {ECO:0000313|EMBL:OWQ90597.1};
OS Sphingopyxis witflariensis.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingopyxis.
OX NCBI_TaxID=173675 {ECO:0000313|EMBL:OWQ90597.1, ECO:0000313|Proteomes:UP000197097};
RN [1] {ECO:0000313|EMBL:OWQ90597.1, ECO:0000313|Proteomes:UP000197097}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14551 {ECO:0000313|EMBL:OWQ90597.1,
RC ECO:0000313|Proteomes:UP000197097};
RX PubMed=12508864; DOI=10.1099/ijs.0.02217-0;
RA Kampfer P., Witzenberger R., Denner E.B., Busse H.J., Neef A.;
RT "Sphingopyxis witflariensis sp. nov., isolated from activated sludge.";
RL Int. J. Syst. Evol. Microbiol. 52:2029-2034(2002).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWQ90597.1}.
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DR EMBL; NISJ01000021; OWQ90597.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A246JDM4; -.
DR OrthoDB; 9791494at2; -.
DR Proteomes; UP000197097; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000150; F:DNA strand exchange activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR CDD; cd00338; Ser_Recombinase; 1.
DR Gene3D; 3.40.50.1390; Resolvase, N-terminal catalytic domain; 1.
DR InterPro; IPR038109; DNA_bind_recomb_sf.
DR InterPro; IPR011109; DNA_bind_recombinase_dom.
DR InterPro; IPR006118; Recombinase_CS.
DR InterPro; IPR006119; Resolv_N.
DR InterPro; IPR036162; Resolvase-like_N_sf.
DR InterPro; IPR025827; Zn_ribbon_recom_dom.
DR PANTHER; PTHR30461; DNA-INVERTASE FROM LAMBDOID PROPHAGE; 1.
DR PANTHER; PTHR30461:SF2; RESOLVASE HOMOLOG YNEB; 1.
DR Pfam; PF07508; Recombinase; 1.
DR Pfam; PF00239; Resolvase; 1.
DR Pfam; PF13408; Zn_ribbon_recom; 1.
DR SMART; SM00857; Resolvase; 1.
DR SUPFAM; SSF53041; Resolvase-like; 1.
DR PROSITE; PS51737; RECOMBINASE_DNA_BIND; 1.
DR PROSITE; PS00397; RECOMBINASES_1; 1.
DR PROSITE; PS51736; RECOMBINASES_3; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000197097}.
FT DOMAIN 19..171
FT /note="Resolvase/invertase-type recombinase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS51736"
FT DOMAIN 175..306
FT /note="Recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51737"
FT COILED 404..431
FT /evidence="ECO:0000256|SAM:Coils"
FT ACT_SITE 27
FT /note="O-(5'-phospho-DNA)-serine intermediate"
FT /evidence="ECO:0000256|PIRSR:PIRSR606118-50,
FT ECO:0000256|PROSITE-ProRule:PRU10137"
SQ SEQUENCE 564 AA; 63106 MW; 5B851A4284D0CA68 CRC64;
MTDAALRVEE TPPVMATARA ALYLRVSTGR QAESDLSIPD QRRQIEGYCL SRGWEVAAEF
VEPGNTATDD RRPAFQAMID AAMVKPPTFN VILVHSFSRF FRDQFQFEFY VRKLAKNGVK
LVSITQDLGD DPMSIMMRQI MTLFDEYQSK ENGKHTLRAM KENARQGFWN GARAPIGYRV
VAAGERGAKI KKKLEIDPIQ AETVRRIYRM ALNGVDNRGP MGLKSIATWL NENNIRTRDG
GRWGLGAVHQ VLTRTTYIGQ HRFNTRDHKT RTPKPEAEHA VMEVPAIVSE AEFEAVQRSL
KARSPKMMAP MAVGGPTLLT GICFCACCGG AMTLRTGTSS VGREYRYYTC STKARQGAIG
CPGITVPMDQ LNKAVVDHLE ARLLDPARLE VLMDQILERR DEWVNQRREH VADLERRATE
AEAKLKRLYD AIENGVIDVS DPSLKDRIAE LTATRDQAKV DAERAVAHIV RIGPAITPES
LRAFAVALRK KLRNGDGTFA RDQVRAVAQR VEVVSRKEVR IRGLRSELLR TLTAASGVEA
AVLGVRAFEP KWRARQDSNL RPPA
//
