ID   A0A250WT64_9CHLO        Unreviewed;      1214 AA.
AC   A0A250WT64;
DT   22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2017, sequence version 1.
DT   24-JAN-2024, entry version 23.
DE   RecName: Full=DNA damage-binding protein 1 {ECO:0008006|Google:ProtNLM};
GN   ORFNames=CEUSTIGMA_g1455.t1 {ECO:0000313|EMBL:GAX74005.1};
OS   Chlamydomonas eustigma.
OC   Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC   CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.
OX   NCBI_TaxID=1157962 {ECO:0000313|EMBL:GAX74005.1, ECO:0000313|Proteomes:UP000232323};
RN   [1] {ECO:0000313|EMBL:GAX74005.1, ECO:0000313|Proteomes:UP000232323}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NIES-2499 {ECO:0000313|EMBL:GAX74005.1,
RC   ECO:0000313|Proteomes:UP000232323};
RA   Hirooka S., Hirose Y., Kanesaki Y., Higuchi S., Fujiwara T., Onuma R.,
RA   Era A., Ohbayashi R., Uzuka A., Nozaki H., Yoshikawa H., Miyagishima S.Y.;
RT   "Acidophilic green algal genome provides insights into adaptation to an
RT   acidic environment.";
RL   Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the RSE1 family.
CC       {ECO:0000256|ARBA:ARBA00038266}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:GAX74005.1}.
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DR   EMBL; BEGY01000005; GAX74005.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A250WT64; -.
DR   STRING; 1157962.A0A250WT64; -.
DR   OrthoDB; 101343at2759; -.
DR   Proteomes; UP000232323; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   PANTHER; PTHR10644:SF1; SPLICING FACTOR 3B SUBUNIT 3; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 2.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000232323}.
FT   DOMAIN          75..590
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          852..1180
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
SQ   SEQUENCE   1214 AA;  132882 MW;  CF32422FF609DFFF CRC64;
     MHLYNLTLSR ASGIQCAIYG NFSGPKAQEL VVSRGKVMEL LRPNESGKLQ TVVATEIFGC
     IRSLSAFRMI GASTDYIVVG SDSGRIVILK FNKEKNSFQK VHQETYGRSG CRRIVPGQYI
     ACDPKGRACM IAAVEKQKFV YVLNRDNAAN LTISSPLEAH KSHTIVFSIV GMDMGFDNPV
     FAAIELDYGD VDQDPTGEAA TEVQKHLTLY ELDLGVNNVI RKWSDPVDNG ANLLVAVPGG
     GDGPGGVLVC SENFIIYKNQ DHEDVRAVIP RRSDLLADRG VLIVCYATHK KKAYSFFLVQ
     SEYGDIYKVT LAYEGDTVTE VKIKYFDTIP VCTSICVLKT GFLYAASEAG NHALYQFIGT
     GEDEEDVESS SLNLQETEDG FQPVFFDPRP LKNLLLIDET SSLMPITDMK VVNLLKEEIP
     QIYAICGHGP RSTLAVLRPG LAVTELAISS LPSAPTAVWT IKRSTTDEFD AYIIVSFSNV
     TLVFSIGEEV KETNDSGFLG TVSTIHTQLL SDSSMLQVHA GGLRHIKNDR RINEWKVPGR
     RSITKAASNE KQVAIALSGG EVIYFELDQM GQLLEERKRD MDEDVTCMDI APVPEGLIRS
     RYLAVGCANG AVKILGLDHE DGLKDLALQA MQSTPYSALM LYSAAVDEGG PVGGVSEAGG
     LFLHVGLDNG VLTRTEVDRV TGQLSDTRSR FLGTRPPRLF ATTVRGSRSM LALSSRPWLG
     YSDQGRFNIS PLSYEALDYA SGFASDQCPE GFVSVLKDQL RILSVENVGE SFNQQVTRLR
     YTPRKMLVHP QHNTLIIAEA DHGAIPLAQR ADLQQRAEQS GQALQGVEFD EEAAALEEQF
     GAPRGEAGQW ACCLRVVDPA ALVTTFVLEL DNNEAVTSMA IVAFNPAAQI AAGAASHEPL
     LVVGTAKGLK YLPTDCDAAY IRTYKILDGG KRIDLLHKTQ LEIAAVPGAL TGFKGRLLAG
     VGNVLRIYEL GKKKLLRKCE YKKLPHHIMY LNVQGGRIYV GDAQESIHLM KYKNNDNQLY
     CFADEASPRY LTTLLPLDFD TVAGADKFGN VFVARLPADV SSQVEEDPSG GKLAAMMNSL
     NGAPHKLKAL VNFHVGDTVT ALQRASLQPG GQEVILYATA MGSIGALYPF TSKEDIDFFV
     HLEMHLRQEN QPLCGREHMA FRSAYFPVKD VVDGDMCAQY PTLPVAKQRS IAEELERSPG
     EVLKKLEDIR NKIL
//