ID A0A251L7P9_MANES Unreviewed; 1052 AA.
AC A0A251L7P9;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=MANES_03G066800 {ECO:0000313|EMBL:OAY54335.1};
OS Manihot esculenta (Cassava) (Jatropha manihot).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae;
OC Manihot.
OX NCBI_TaxID=3983 {ECO:0000313|EMBL:OAY54335.1, ECO:0000313|Proteomes:UP000091857};
RN [1] {ECO:0000313|EMBL:OAY54335.1, ECO:0000313|Proteomes:UP000091857}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. AM560-2 {ECO:0000313|Proteomes:UP000091857};
RC TISSUE=Leaf {ECO:0000313|EMBL:OAY54335.1};
RA Bredeson J.V., Prochnik S.E., Lyons J.B., Schmutz J., Grimwood J.,
RA Vrebalov J., Bart R.S., Amuge T., Ferguson M.E., Green R., Putnam N.,
RA Stites J., Rounsley S., Rokhsar D.S.;
RT "WGS assembly of Manihot esculenta.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM004389; OAY54335.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251L7P9; -.
DR STRING; 3983.A0A251L7P9; -.
DR EnsemblPlants; OAY54335; OAY54335; MANES_03G066800.
DR EnsemblPlants; OAY54336; OAY54336; MANES_03G066800.
DR Gramene; OAY54335; OAY54335; MANES_03G066800.
DR Gramene; OAY54336; OAY54336; MANES_03G066800.
DR OrthoDB; 1205686at2759; -.
DR Proteomes; UP000091857; Chromosome lg3.
DR GO; GO:0000785; C:chromatin; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0034647; F:histone H3K4me/H3K4me2/H3K4me3 demethylase activity; IBA:GO_Central.
DR GO; GO:0006338; P:chromatin remodeling; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR GO; GO:0022414; P:reproductive process; IEA:UniProt.
DR GO; GO:0048731; P:system development; IEA:UniProt.
DR Gene3D; 3.30.160.360; -; 1.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003889; FYrich_C.
DR InterPro; IPR003888; FYrich_N.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR004198; Znf_C5HC2.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF105; LYSINE-SPECIFIC DEMETHYLASE JMJ14; 1.
DR Pfam; PF05965; FYRC; 1.
DR Pfam; PF05964; FYRN; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR Pfam; PF02928; zf-C5HC2; 1.
DR SMART; SM00542; FYRC; 1.
DR SMART; SM00541; FYRN; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51543; FYRC; 1.
DR PROSITE; PS51542; FYRN; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000091857};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 60..101
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 265..431
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
SQ SEQUENCE 1052 AA; 118918 MW; CA374294E8FD36C4 CRC64;
MEQFKTTSAT ASQSHIKEDS SFKHTSKNDG NLERSGSPRN RKVTARWDPA EACRPIIDEA
PVFYPTVEEF EDTLGYISKL RSKAESFGIC RIVPPSSWTP PCRLKEKDIW EIAKFSTRIQ
QVDLLQNREP MRKKFRSRKR KRRKHSKTGR TRSQATSCEA DEKFGFQSGS DFTLEEYHRY
ADYFKACYFQ MIDSVEDVKL GGNDIEHQKW KPSVEEIEGE YWRIIEQPTD EVEVYYGADL
ETGTFGSGFP KASSMVIEDD SQSEQYVKSG WNLNNFPRLP GSVLCFEESD ISGVLVPWLY
VGMCFSSFCW HVEDHHLYSL NYLHWGDPKI WYGVPGSDAS NLEDAMRKHL PDLFAEQPDL
LHELVTQLSP SVLKAESVPV YRVVQHSGEF VLTFPRAYHS GFNCGFNCAE AVNVAPVDWL
AHGQHAVELY SKQHRKTSIS HDKLLLGSAQ EAVRALSELL VLGKETPGNL RWRSVCGKDG
LLTQAVKTRV QMEEETLQHL PTHLKLQKMD KEFDLCSERE CFTCFYDLHL SAASCKCSPE
KFACLKHANH FCSCKLDDKF VVLRYTMTEL NTIVKALEEE LDAIKMWTSK DPKLDCDDDS
GAHISKLDQK GESFQTSYSK QRESPSCSPR AEEILGTSVS CCSNNQVCLE VMQSDGHGNA
FNSDALIVKK KAKVKQESFI DLNLDFMSVD HENELVPSSD NYNNKVVSDM EMNLSVGKQE
KVSNSNAANE PDVSQVDSDC NSSELHQFSN QVRSSDTRAI GKSFGVDLSI LRSYSMVPSE
SFSDTKTLNT LDVRQSIDDQ NNPAKNLGFL VEPLNFGCVV FGKLWCSRYA IFPKGFRSRV
KFFSVLDPRK ICSYISEVVD AGLIGPLFKV SLEECPREAF ANVSAEKCWE MVLQRLNEEI
TRLNSIRERG LPPVLPLQNI NGLKMFGFLS SPIVRAIEAL DPNHQCIEYW NNRHMNLTST
SEVGESPFRL NCKLLESKAK LGINAVAKDL DNLATEGHLD EEGARQVLQG LFKKASPGEL
QTMHRIFSGE AQSAEWKAAF ATLKEEINKT SI
//