ID A0A251P6F2_PRUPE Unreviewed; 668 AA.
AC A0A251P6F2;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=PRUPE_5G031300 {ECO:0000313|EMBL:ONI05955.1};
OS Prunus persica (Peach) (Amygdalus persica).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus.
OX NCBI_TaxID=3760 {ECO:0000313|EMBL:ONI05955.1, ECO:0000313|Proteomes:UP000006882};
RN [1] {ECO:0000313|EMBL:ONI05955.1, ECO:0000313|Proteomes:UP000006882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nemared {ECO:0000313|Proteomes:UP000006882};
RX PubMed=23525075; DOI=10.1038/ng.2586;
RA Verde I., Abbott A.G., Scalabrin S., Jung S., Shu S., Marroni F.,
RA Zhebentyayeva T., Dettori M.T., Grimwood J., Cattonaro F., Zuccolo A.,
RA Rossini L., Jenkins J., Vendramin E., Meisel L.A., Decroocq V.,
RA Sosinski B., Prochnik S., Mitros T., Policriti A., Cipriani G., Dondini L.,
RA Ficklin S., Goodstein D.M., Xuan P., Del Fabbro C., Aramini V., Copetti D.,
RA Gonzalez S., Horner D.S., Falchi R., Lucas S., Mica E., Maldonado J.,
RA Lazzari B., Bielenberg D., Pirona R., Miculan M., Barakat A., Testolin R.,
RA Stella A., Tartarini S., Tonutti P., Arus P., Orellana A., Wells C.,
RA Main D., Vizzotto G., Silva H., Salamini F., Schmutz J., Morgante M.,
RA Rokhsar D.S.;
RT "The high-quality draft genome of peach (Prunus persica) identifies unique
RT patterns of genetic diversity, domestication and genome evolution.";
RL Nat. Genet. 45:487-494(2013).
RN [2] {ECO:0000313|EMBL:ONI05955.1}
RP NUCLEOTIDE SEQUENCE.
RA Verde I., Jenkins J., Dondini L., Micali S., Pagliarani G., Vendramin E.,
RA Paris R., Aramini V., Gazza L., Rossini L., Bassi D., Troggio M., Shu S.,
RA Grimwood J.H., Tartarini S., Dettori M.T., Schmutz J.;
RT "WGS assembly of Prunus persica.";
RL Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM007655; ONI05953.1; -; Genomic_DNA.
DR EMBL; CM007655; ONI05954.1; -; Genomic_DNA.
DR EMBL; CM007655; ONI05955.1; -; Genomic_DNA.
DR EMBL; CM007655; ONI05956.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251P6F2; -.
DR SMR; A0A251P6F2; -.
DR STRING; 3760.A0A251P6F2; -.
DR EnsemblPlants; ONI05953; ONI05953; PRUPE_5G031300.
DR EnsemblPlants; ONI05954; ONI05954; PRUPE_5G031300.
DR EnsemblPlants; ONI05955; ONI05955; PRUPE_5G031300.
DR EnsemblPlants; ONI05956; ONI05956; PRUPE_5G031300.
DR Gramene; ONI05953; ONI05953; PRUPE_5G031300.
DR Gramene; ONI05954; ONI05954; PRUPE_5G031300.
DR Gramene; ONI05955; ONI05955; PRUPE_5G031300.
DR Gramene; ONI05956; ONI05956; PRUPE_5G031300.
DR eggNOG; KOG0297; Eukaryota.
DR OrthoDB; 21736at2759; -.
DR Proteomes; UP000006882; Chromosome g5.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR CDD; cd16504; RING-HC_COP1; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR042755; COP1.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR44080; E3 UBIQUITIN-PROTEIN LIGASE COP1; 1.
DR PANTHER; PTHR44080:SF7; E3 UBIQUITIN-PROTEIN LIGASE COP1; 1.
DR Pfam; PF00400; WD40; 2.
DR Pfam; PF13923; zf-C3HC4_2; 1.
DR SMART; SM00184; RING; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000006882};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}; Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 51..88
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REPEAT 452..484
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 538..578
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 227..249
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 228..249
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 668 AA; 75497 MW; 5BF75E83F469FE94 CRC64;
MEECSTGALV PAVKPEPKPS SIEASADPGS NDVDRPTHEK GLMEVDKDLL CPICMQLVKD
AFLTACGHSF CYMCIITHLR NKSDCPCCAQ FLSTNQLFPN FLLDKLLKKA SARQISKSAS
PVEHFRQALQ QGCEVSIKEL DTLLTLLAEK KRKMEQEEAE RNMQILLDFL NCLRKQKVEE
LNEVQTHLQF IKEDIGAVER RRMDLYRARD RYSVKLRMLG GDDSISGARK SWPSSIDNNT
SSLSGRAGMS SWNLQPKKLD GWGLQKKDAL SASDSQYMTQ SGLAVARKKR VHSQFDELQE
CYLQKRRQMA NQPYTQQERD KNVMQREGYT TGLADFQSVL TTLTRYSRMR VIAELRHGDL
FHPANIVSSI EFDRDYELFA TAGVSRCIKV FDFSSVVNDP ADVHCPVVEM PTRSKLSCLS
WNKFTKNHIA STDYEGIVTV WDVNTRQSVM EYEEHEKRAW SVDFSCTEPT RLVSGSDDCK
VKVWCTRQET SVLDIDMKAN ICCVKYNPGS SNCIAVGSAD HHIHYYDLRN PSQPLHVFTG
HKKAVSYVKF LSNYELASAS TDSTLRLWNV KENIPVRTFK GHTNEKNFVG LTVNGEYIAC
GSETNEVFVY HKEISKPVTW HRFGSPDLDD TDDDAGSYFI SAVCWKSDSP TMLTANSQGT
IKVLVLAA
//