ID A0A251RE61_PRUPE Unreviewed; 750 AA.
AC A0A251RE61;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=LisH domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=PRUPE_1G468400 {ECO:0000313|EMBL:ONI34217.1};
OS Prunus persica (Peach) (Amygdalus persica).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus.
OX NCBI_TaxID=3760 {ECO:0000313|EMBL:ONI34217.1, ECO:0000313|Proteomes:UP000006882};
RN [1] {ECO:0000313|EMBL:ONI34217.1, ECO:0000313|Proteomes:UP000006882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nemared {ECO:0000313|Proteomes:UP000006882};
RX PubMed=23525075; DOI=10.1038/ng.2586;
RA Verde I., Abbott A.G., Scalabrin S., Jung S., Shu S., Marroni F.,
RA Zhebentyayeva T., Dettori M.T., Grimwood J., Cattonaro F., Zuccolo A.,
RA Rossini L., Jenkins J., Vendramin E., Meisel L.A., Decroocq V.,
RA Sosinski B., Prochnik S., Mitros T., Policriti A., Cipriani G., Dondini L.,
RA Ficklin S., Goodstein D.M., Xuan P., Del Fabbro C., Aramini V., Copetti D.,
RA Gonzalez S., Horner D.S., Falchi R., Lucas S., Mica E., Maldonado J.,
RA Lazzari B., Bielenberg D., Pirona R., Miculan M., Barakat A., Testolin R.,
RA Stella A., Tartarini S., Tonutti P., Arus P., Orellana A., Wells C.,
RA Main D., Vizzotto G., Silva H., Salamini F., Schmutz J., Morgante M.,
RA Rokhsar D.S.;
RT "The high-quality draft genome of peach (Prunus persica) identifies unique
RT patterns of genetic diversity, domestication and genome evolution.";
RL Nat. Genet. 45:487-494(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM007651; ONI34217.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251RE61; -.
DR EnsemblPlants; ONI34217; ONI34217; PRUPE_1G468400.
DR Gramene; ONI34217; ONI34217; PRUPE_1G468400.
DR Proteomes; UP000006882; Chromosome g1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR45093; TRANSCRIPTION ACTIVATOR MSS11; 1.
DR PANTHER; PTHR45093:SF2; TRANSCRIPTION ACTIVATOR MSS11; 1.
DR Pfam; PF08513; LisH; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00667; LisH; 1.
DR SMART; SM00320; WD40; 2.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000006882};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 634..675
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 676..717
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 106..135
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 162..202
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 435..559
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 435..473
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 480..540
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 750 AA; 82860 MW; F5AC404C8CC5020D CRC64;
MSQTNWEADK MLDVYIHDYL VKRDLKASAQ AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW
DIFIARTNEK HSEVAASYIE TQLIKAREQQ QQQQQQQQQQ QQQQQQQQSQ QPQHSQQQQQ
QQQQHMQMQQ LLLHRHAQQQ QQQQQQQQQQ QQQQQQQQQQ QQQPQQQQQQ PQPQQRRDGV
HFLNGTTNGL VGNDPLMRQN PGTANAMATK MYEEKLKLPL QRDSLDDASM KQRFGENVGQ
ILDQNHASIL KSAAAAGQPS GQVLHGTAGG MTQQVQARNQ QLPGSTPDIK TEINPVLNPR
AACPEGSLIG IPGSNQGGNN LTLKGWPLTG LEQLRSGLLQ QQKPFIQAPQ PFHQLQMLTP
QHQQQLMLAQ QNLTSPSASD ESRRLRMLMN NRSMGLGKDG LPNSVGDVGS PLQAAGPIMP
RGDTDMLIKL KMAHLHQQQN SNPQQQQQQL QQHNLSAQQS QSSNLNPHQQ DKIGGAGSIT
MDGSISNSFR GNDQVSKNQA GRKRKQPVSS SGPANSTGTA NTAGPSPSSA PSTPSTHTPG
DVISMPALPH SGSSSKPLMM FGPDGTGTLT SPSNQLWDDK DLELQADMDR FVEDGSLDDN
VESFLSHDDV DPRDAVGRCM DVSKGFTFTE VHSVKASTTK VNSCHFSSDG KFLASGGHDK
KAVLWYTDTL KVKSTLEEHS ALITDVRFSP SMPRLATSSF DKTVRVWDAD NISTQIKMTL
SAPATRMVRY ATGVLTMAAA QVCSRVVQHR
//
