ID A0A251RKY8_PRUPE Unreviewed; 822 AA.
AC A0A251RKY8;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=Zinc finger PHD-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=PRUPE_1G582800 {ECO:0000313|EMBL:ONI36370.1};
OS Prunus persica (Peach) (Amygdalus persica).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus.
OX NCBI_TaxID=3760 {ECO:0000313|EMBL:ONI36370.1, ECO:0000313|Proteomes:UP000006882};
RN [1] {ECO:0000313|EMBL:ONI36370.1, ECO:0000313|Proteomes:UP000006882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nemared {ECO:0000313|Proteomes:UP000006882};
RX PubMed=23525075; DOI=10.1038/ng.2586;
RA Verde I., Abbott A.G., Scalabrin S., Jung S., Shu S., Marroni F.,
RA Zhebentyayeva T., Dettori M.T., Grimwood J., Cattonaro F., Zuccolo A.,
RA Rossini L., Jenkins J., Vendramin E., Meisel L.A., Decroocq V.,
RA Sosinski B., Prochnik S., Mitros T., Policriti A., Cipriani G., Dondini L.,
RA Ficklin S., Goodstein D.M., Xuan P., Del Fabbro C., Aramini V., Copetti D.,
RA Gonzalez S., Horner D.S., Falchi R., Lucas S., Mica E., Maldonado J.,
RA Lazzari B., Bielenberg D., Pirona R., Miculan M., Barakat A., Testolin R.,
RA Stella A., Tartarini S., Tonutti P., Arus P., Orellana A., Wells C.,
RA Main D., Vizzotto G., Silva H., Salamini F., Schmutz J., Morgante M.,
RA Rokhsar D.S.;
RT "The high-quality draft genome of peach (Prunus persica) identifies unique
RT patterns of genetic diversity, domestication and genome evolution.";
RL Nat. Genet. 45:487-494(2013).
RN [2] {ECO:0000313|EMBL:ONI36370.1}
RP NUCLEOTIDE SEQUENCE.
RA Verde I., Jenkins J., Dondini L., Micali S., Pagliarani G., Vendramin E.,
RA Paris R., Aramini V., Gazza L., Rossini L., Bassi D., Troggio M., Shu S.,
RA Grimwood J.H., Tartarini S., Dettori M.T., Schmutz J.;
RT "WGS assembly of Prunus persica.";
RL Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM007651; ONI36367.1; -; Genomic_DNA.
DR EMBL; CM007651; ONI36368.1; -; Genomic_DNA.
DR EMBL; CM007651; ONI36369.1; -; Genomic_DNA.
DR EMBL; CM007651; ONI36370.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251RKY8; -.
DR EnsemblPlants; ONI36367; ONI36367; PRUPE_1G582800.
DR EnsemblPlants; ONI36368; ONI36368; PRUPE_1G582800.
DR EnsemblPlants; ONI36369; ONI36369; PRUPE_1G582800.
DR EnsemblPlants; ONI36370; ONI36370; PRUPE_1G582800.
DR Gramene; ONI36367; ONI36367; PRUPE_1G582800.
DR Gramene; ONI36368; ONI36368; PRUPE_1G582800.
DR Gramene; ONI36369; ONI36369; PRUPE_1G582800.
DR Gramene; ONI36370; ONI36370; PRUPE_1G582800.
DR Proteomes; UP000006882; Chromosome g1.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15568; PHD5_NSD; 1.
DR Gene3D; 3.30.1490.40; -; 1.
DR Gene3D; 3.90.70.200; Plus-3 domain; 1.
DR Gene3D; 1.10.245.10; SWIB/MDM2 domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR045894; At5g08430-like.
DR InterPro; IPR035445; GYF-like_dom_sf.
DR InterPro; IPR004343; Plus-3_dom.
DR InterPro; IPR036128; Plus3-like_sf.
DR InterPro; IPR036885; SWIB_MDM2_dom_sf.
DR InterPro; IPR003121; SWIB_MDM2_domain.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46851; OS01G0884500 PROTEIN; 1.
DR PANTHER; PTHR46851:SF22; PLUS3 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF03126; Plus-3; 1.
DR Pfam; PF02201; SWIB; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00719; Plus3; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF55277; GYF domain; 1.
DR SUPFAM; SSF159042; Plus3-like; 1.
DR SUPFAM; SSF47592; SWIB/MDM2 domain; 1.
DR PROSITE; PS51360; PLUS3; 1.
DR PROSITE; PS51925; SWIB_MDM2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000006882};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 192..275
FT /note="DM2"
FT /evidence="ECO:0000259|PROSITE:PS51925"
FT DOMAIN 328..457
FT /note="Plus3"
FT /evidence="ECO:0000259|PROSITE:PS51360"
FT REGION 518..572
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 609..660
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 696..722
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 522..536
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 552..572
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 609..646
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 822 AA; 93323 MW; 0911F0E575BAF453 CRC64;
MPRKNKRRKE EICEDYCFAC KDGGDVRVCD YKDCLKVYHP QCVGKDDSFL KSKDRWTCNW
HSCFICHKTA KFHCFCCPKG VCGICLWDAE FALVKGGEGF CSHCLKLAIL IEEKLDVDSD
GGKVDFKERN TLEFLFQEYW QIIKEKQGLS AEHVHYAKNL LKSGKEEYMP VSKKKRSKGK
LSAMKRKVKA KKIEFIGWGS KSLLSFLTSI GKDTSKELSQ NEVTTVVTNY CKENNLFDPQ
KRKKVIFDAM LQSLLGKKST SVNRIYNLLT AHFCDNLELT EDDETGSSSE DKDQNFMVTC
KRQNKLISDG QPQKKKVVPN VRKSCFASVI AENIKLLYLK RSLVEKLLKQ PETFDEKVVG
SFVRVKFDPN DYSQKNSHQL LQVKGIKKTS RTGVMNTEVF LQFSNMSKDV PIGKLSDDDF
CQEECEDLHQ RVKDGLLRRP TVAELELKAR RLHEDIMKHW IGRELSLLQK RIDKANEKGW
RRELAQYMDK KLLLEMPSEQ SRLLNEVPEV ITDIENFEPT LENSPSHDKR QHDGLPEALR
GSSQTPSSDK RENFEPTPEN SPSHDKREHD GLPEALRGSS QILSSGLANG TLYYPKGGID
PADISKFGSA LENSSSQDKQ ENDGSPFSAI KGPSQTPSTD LANGTLCYPN GRTDPAEVQG
GIHHGRHRQY VHVEKKSSKV LFPKALEQKS LDFASKGQPD VSQQKPHHFS SGIVGERPSA
PEDVQHKVKN QSTSEAEFIE LSDDDEDVRG EIVAPAFEDP YSALWHCVSP LGDTRGPFKM
SLLKQWNDSS DRELKFKVWR EGQTKEEAIF LTDAIRQNFP GT
//
