ID A0A251RMN1_HELAN Unreviewed; 1196 AA.
AC A0A251RMN1;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=HannXRQ_Chr17g0541371 {ECO:0000313|EMBL:OTF85572.1},
GN HanXRQr2_Chr17g0789901 {ECO:0000313|EMBL:KAF5754326.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTF85572.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|EMBL:KAF5754326.1, ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5754326.1};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
RN [2] {ECO:0000313|EMBL:OTF85572.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaves {ECO:0000313|EMBL:OTF85572.1};
RA Langlade N., Munos S.;
RT "Sunflower complete genome.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAF5754326.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5754326.1};
RA Gouzy J., Langlade N., Munos S.;
RT "Helianthus annuus Genome sequencing and assembly Release 2.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
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DR EMBL; MNCJ02000332; KAF5754326.1; -; Genomic_DNA.
DR EMBL; CM007906; OTF85572.1; -; Genomic_DNA.
DR STRING; 4232.A0A251RMN1; -.
DR EnsemblPlants; mRNA:HanXRQr2_Chr17g0789901; mRNA:HanXRQr2_Chr17g0789901; HanXRQr2_Chr17g0789901.
DR Gramene; mRNA:HanXRQr2_Chr17g0789901; mRNA:HanXRQr2_Chr17g0789901; HanXRQr2_Chr17g0789901.
DR InParanoid; A0A251RMN1; -.
DR OMA; MWASKRE; -.
DR OrthoDB; 53793at2759; -.
DR Proteomes; UP000215914; Chromosome 17.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IBA:GO_Central.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR CDD; cd17917; DEXHc_RHA-like; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 3.30.1370.50; R3H-like domain; 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001374; R3H_dom.
DR InterPro; IPR036867; R3H_dom_sf.
DR PANTHER; PTHR18934:SF213; 3'-5' RNA HELICASE YTHDC2; 1.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF01424; R3H; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00393; R3H; 1.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF82708; R3H domain; 1.
DR PROSITE; PS50088; ANK_REPEAT; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51061; R3H; 1.
PE 4: Predicted;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW ProRule:PRU00023}; ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:KAF5754326.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:KAF5754326.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000215914}.
FT DOMAIN 36..99
FT /note="R3H"
FT /evidence="ECO:0000259|PROSITE:PS51061"
FT DOMAIN 226..406
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT REPEAT 493..525
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 590..764
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1160..1196
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 7..39
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1196 AA; 133706 MW; 7EE8A035256FD008 CRC64;
MEPASLPEES RPQKRSRAEK RKENKKQLQE ARRISDETRN RFQQILDDFH KSNDKEYTFD
ASISNYERAE VHKLWRAMGM TSQSSGAGAN RRVTLYKIMA KVKRKPRGSA WTQPGTQTKS
DNTEVKSPVM SFAFSEEGKT VLKDFFSFYS PGDHKEDEKI AVTSSENANK TPMRNDDMFC
KPRTTKGQVE KKFQSFVARM QSDRNLKQIT ENRSKLPIAS FKDVITSTVE SNQVVLISGQ
TGCGKTTQVP QYLLDYMWSK GEECKIVCTQ PRRISAVSVA ERIASERGEA IGQSVGYKIK
LDTKGGRRSS VVFCTNGVLL RILVHAGNTL AGKEKSAKTV KDAFPDITHI IVDEIHERDR
FSDFMLTIIR DILPIYPHLR VVLMSATLDA ERFSQYFGGC PIICVPGFTY DVKRFYLEDV
LLLVKSESTN ARSLVGTSNA KISAKSELPE DYKRALDEAI NIAWSSDELE FLLDIIGTMG
EGLDVSNYQH SVTGVTPLMV LARKGRVGDI CMLLSFGANC HLQDNEGKTA LSWAQHAGQK
EVSEILQKHL NSTELDTEEE KRLELDTEEE KRLLDRYLKD VNPEVVDIIL IEQLLRKICT
ESEEGAILVF LPGWDEIQKL NDKLLSSNFF NNASKFLILP LHSMVPSIDQ KKVFVRPPHG
CRKIVLSTNV AETSVTIDDV VFVIDSGRAK EKSYDPFIRV STLQTCWISK ANAKQREGRA
GRCQPGICYH LYSKLRAASL AEFQEPEIKR TPIEELCLQV KLLNPDCKIE DFLKKTLDPP
VSLAIHNAIT VLQDVGALSP NEELTKFGEK IASIAVHPVT IKMLLFAISM NCLDPALTLA
CANDFRDPFI FPMSLAGKSE ANAAKSKLAS VYGGHGDQLA IIAAFECWKN AKERGQEARF
CRKYFVAAGG MRMLSAMREQ LRRELCMNGF IPKDSSRLSE NSQDKGIINA VIVAGLYPRV
GRLFLDGRAK RYISDVNEQK VMLGRQSVNS RVTLKKKKVD PLVIYDEVTL GDMGFAIKKC
SIIGPLSVLL LATEIAVAPI NDDNETVSED GNKERHEDEF MSNPDTAVEV VADRWLSFKS
TALDAAQICC LRERLSDAIL FKITHLGKDL PPVLAASVAA IAKVLSCDGL AGISEMIGEN
GKISGLSTLL NNKVKKRKIY KPKSREYKPW RPSENQHPNC DAPSGSSRKR GREDMA
//