ID A0A251RNV5_HELAN Unreviewed; 762 AA.
AC A0A251RNV5;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN ORFNames=HannXRQ_Chr17g0546211 {ECO:0000313|EMBL:OTF86022.1},
GN HanXRQr2_Chr11g0480621 {ECO:0000313|EMBL:KAF5781193.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTF86022.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|EMBL:KAF5781193.1, ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5781193.1};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
RN [2] {ECO:0000313|EMBL:OTF86022.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaves {ECO:0000313|EMBL:OTF86022.1};
RA Langlade N., Munos S.;
RT "Sunflower complete genome.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAF5781193.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5781193.1};
RA Gouzy J., Langlade N., Munos S.;
RT "Helianthus annuus Genome sequencing and assembly Release 2.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR EMBL; MNCJ02000326; KAF5781193.1; -; Genomic_DNA.
DR EMBL; CM007906; OTF86022.1; -; Genomic_DNA.
DR STRING; 4232.A0A251RNV5; -.
DR EnsemblPlants; mRNA:HanXRQr2_Chr11g0480621; mRNA:HanXRQr2_Chr11g0480621; HanXRQr2_Chr11g0480621.
DR Gramene; mRNA:HanXRQr2_Chr11g0480621; mRNA:HanXRQr2_Chr11g0480621; HanXRQr2_Chr11g0480621.
DR InParanoid; A0A251RNV5; -.
DR OMA; YMINEEV; -.
DR OrthoDB; 1200549at2759; -.
DR Proteomes; UP000215914; Chromosome 17.
DR GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IBA:GO_Central.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08603; GDPD_SHV3_repeat_1; 1.
DR CDD; cd08604; GDPD_SHV3_repeat_2; 1.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 2.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR43620:SF32; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 2.
DR PROSITE; PS51704; GP_PDE; 2.
PE 4: Predicted;
KW Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:KAF5781193.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000215914};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..27
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 28..762
FT /note="glycerophosphodiester phosphodiesterase"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5041081787"
FT DOMAIN 45..343
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT DOMAIN 358..661
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT REGION 697..739
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 762 AA; 83316 MW; 6EF3565890451301 CRC64;
MHLPGMWNLR YLVYLLLLVC SISFVGAQGS DNTNSPWKTL AGKRPLVIAN GGFSGLFPGS
SLNAYLFALF TSLPDAVLWC DVQLTKDNIG ICFPYLNLEN SSTIATKFPK RESTHNVNGV
SLKGYFPVDF TLDDLANVQL TQGIYSRTPN FDGSYSILTV NKVAATKPPG LWLNVQHDAF
YTKHNLSMRG YVMAASKKVV ISYISSPEVN FLRSIVKRFS PRTTKLVFRF LGKNDIEPTT
NQTYDSLLKN LTFITTFAQG IIVPKSYIWP VGSDLYLQPS TSLVEDAHKA GLEVFASGFV
NDIPFAYNYS YDPVQEYLQF VDNGVFAVDG VISDNPITSS AAIGCLSHLG NNKTQEKPWI
ISYEGTSGDY PGCTNLAYQK AVSDGADIID CPVQITSDGI PICLGSINLL ERTTVAQSSF
INLTTSIPDI QSDSGIFTFS LTWDQIQSLK PTMYTPYSTD YGLLRNPIFK NAGRFMRLSD
FLDFASNATS VSGVMISIKH ASYLAVNKGL SVTDAVMDVL DKSLINNQST KKVLIASPDS
AVLKLFKARS NKHELVYEVD ELIRDALNST VEEISEFANS VIIQKESVFT NNHGFLVDQT
DVVAKLHAFK LLVYVQPFNN EFVSQAWDFF SDPYVEINSY VNEAKIDGVI TSYPATASKY
RRNHCLGLPA NQTPAYMTPA GPGQLFSLMT PQLIPPAEAP NPVLEDDDVA QGPLPSSGMP
SPPSRNGTAA APRASPSGQP PKTVAGILFS VVVVVGTTVL VF
//
