ID A0A251SYP5_HELAN Unreviewed; 590 AA.
AC A0A251SYP5;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Putative RNA editing factor {ECO:0000313|EMBL:OTG03948.1};
DE SubName: Full=Tetratricopeptide-like helical domain superfamily, DYW domain-containing protein {ECO:0000313|EMBL:KAF5776485.1};
GN ORFNames=HannXRQ_Chr12g0356951 {ECO:0000313|EMBL:OTG03948.1},
GN HanXRQr2_Chr12g0524781 {ECO:0000313|EMBL:KAF5776485.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTG03948.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|EMBL:KAF5776485.1, ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5776485.1};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
RN [2] {ECO:0000313|EMBL:OTG03948.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaves {ECO:0000313|EMBL:OTG03948.1};
RA Langlade N., Munos S.;
RT "Sunflower complete genome.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAF5776485.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5776485.1};
RA Gouzy J., Langlade N., Munos S.;
RT "Helianthus annuus Genome sequencing and assembly Release 2.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; MNCJ02000327; KAF5776485.1; -; Genomic_DNA.
DR EMBL; CM007901; OTG03948.1; -; Genomic_DNA.
DR EnsemblPlants; mRNA:HanXRQr2_Chr12g0524781; CDS:HanXRQr2_Chr12g0524781.1; HanXRQr2_Chr12g0524781.
DR Gramene; mRNA:HanXRQr2_Chr12g0524781; CDS:HanXRQr2_Chr12g0524781.1; HanXRQr2_Chr12g0524781.
DR InParanoid; A0A251SYP5; -.
DR OMA; HGLCFKT; -.
DR OrthoDB; 1203801at2759; -.
DR Proteomes; UP000215914; Chromosome 12.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR24015:SF2048; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 7.
DR PROSITE; PS51375; PPR; 4.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000215914};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 82..116
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 152..186
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 284..318
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 319..353
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 498..590
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 590 AA; 66662 MW; 2C46F913124B36C8 CRC64;
MLTIPQQSPQ STFEQNYRNI SSLLLSATRS RTLRDGIQLH AHIIKLGLQT IPIISHYLIN
FYSKTQLPID SQRVFEQTQI KTSTTWSSVI SSFAQNELPV LALQYFKKMI AFGVRPDDHI
FPSATKAAAI LSSYDVGRCV HCYAVKIAYD SDVFVASSVV DMYAKCGRIG DARKMFDEMP
VRNVVSWSGM IYGYAQLGEN EEALWLFKQA LFERFEVNDF TFTSVIRVCG NTTLLGLGKQ
LHGLCLKLSF GSSSFVGSSL ISMYSKCGVI ELAYLVFDEI PVRNLGMWNA MLMACAQHSH
TNNVFDLFKQ MESSNMKPNF ITFLGILYSC SHSGLVEKGK YYFNLMKQYG IEPSDQHYAS
MVDILGRANK VQEALAIIEE MPMQPTECVW GALLTGCRLH GDTELAAYAA DKVFELGSVG
SGMYVLLSNA YAAAGRYEDA ARARKMLRDT GVKKETGLSW VEEGNIVHTF CSGDRRHFRS
NEIYNKLEEL EDEMEKIGYV ADTSHVLKEV GDEEKNMAIR YHSERIAIAF ALITFKDDRP
IRIMKNLRIC GDCHTAIKFM SKCCGRVIIV RDNNRFHRFE DGKCSCSDYW
//
