ID A0A251SZR3_HELAN Unreviewed; 371 AA.
AC A0A251SZR3;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Putative translation elongation factor EFTs/EF1B, Nucleic acid-binding, OB-fold protein {ECO:0000313|EMBL:OTG03776.1};
DE SubName: Full=Translation elongation factor EFTs/EF1B, nucleic acid-binding, RNA-binding domain, S1 {ECO:0000313|EMBL:KAF5776271.1};
GN ORFNames=HannXRQ_Chr12g0355051 {ECO:0000313|EMBL:OTG03776.1},
GN HanXRQr2_Chr12g0522431 {ECO:0000313|EMBL:KAF5776271.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTG03776.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|EMBL:KAF5776271.1, ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5776271.1};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
RN [2] {ECO:0000313|EMBL:OTG03776.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaves {ECO:0000313|EMBL:OTG03776.1};
RA Langlade N., Munos S.;
RT "Sunflower complete genome.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAF5776271.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5776271.1};
RA Gouzy J., Langlade N., Munos S.;
RT "Helianthus annuus Genome sequencing and assembly Release 2.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; MNCJ02000327; KAF5776271.1; -; Genomic_DNA.
DR EMBL; CM007901; OTG03776.1; -; Genomic_DNA.
DR STRING; 4232.A0A251SZR3; -.
DR EnsemblPlants; mRNA:HanXRQr2_Chr12g0522431; mRNA:HanXRQr2_Chr12g0522431; HanXRQr2_Chr12g0522431.
DR Gramene; mRNA:HanXRQr2_Chr12g0522431; mRNA:HanXRQr2_Chr12g0522431; HanXRQr2_Chr12g0522431.
DR InParanoid; A0A251SZR3; -.
DR OrthoDB; 691199at2759; -.
DR Proteomes; UP000215914; Chromosome 12.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 2.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR003029; S1_domain.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF14; S1 MOTIF DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00575; S1; 2.
DR SMART; SM00316; S1; 2.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 2.
DR PROSITE; PS50126; S1; 2.
PE 4: Predicted;
KW Elongation factor {ECO:0000313|EMBL:OTG03776.1};
KW Protein biosynthesis {ECO:0000313|EMBL:OTG03776.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000215914}.
FT DOMAIN 124..193
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 223..293
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 78..121
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 190..220
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 334..371
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 78..98
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 99..117
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 203..220
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 334..352
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 371 AA; 40089 MW; 13E6927BDA1264D3 CRC64;
MTRAIPSSTS SISLIPGCTF NTIKTKSGSI KCCVLPLSTS LRLFTHIGAF GSHHKPRFGV
ALATGVDVDV PVEQQADQLD STVSGQDSGQ TSKPTSTVDK SKQRSRPVRK SEMPPVKDEE
LVPGATFTGK VRSIQPFGAF VDFGAFTDGL VHVSQLSDGY VKDVSSVVSV GQEVKVKLVE
ANIETGRITL TMRENESSKN TGQKSNPRRD RDEGRKSTKF VKGQELEGTV KNLTRSGAFI
NLSEGEEGFL PASEEADEGF GSLMGGGSSL EIGQEVKVRV LRIARGQVTL TMKKDDDNKD
LDSKLQGKVF TATNPFLIAF RENKDLASFL DDREKVEGED VKSSDEDVIK PVSDENGSII
SEEQVEIPQV A
//
