ID A0A251T2G5_HELAN Unreviewed; 906 AA.
AC A0A251T2G5;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Putative tetratricopeptide-like helical domain, DYW domain protein {ECO:0000313|EMBL:OTG04862.1};
DE SubName: Full=Tetratricopeptide-like helical domain superfamily, DYW domain-containing protein {ECO:0000313|EMBL:KAF5777724.1};
GN ORFNames=HannXRQ_Chr12g0367091 {ECO:0000313|EMBL:OTG04862.1},
GN HanXRQr2_Chr12g0539091 {ECO:0000313|EMBL:KAF5777724.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTG04862.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|EMBL:KAF5777724.1, ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5777724.1};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
RN [2] {ECO:0000313|EMBL:OTG04862.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaves {ECO:0000313|EMBL:OTG04862.1};
RA Langlade N., Munos S.;
RT "Sunflower complete genome.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAF5777724.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5777724.1};
RA Gouzy J., Langlade N., Munos S.;
RT "Helianthus annuus Genome sequencing and assembly Release 2.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; MNCJ02000327; KAF5777724.1; -; Genomic_DNA.
DR EMBL; CM007901; OTG04862.1; -; Genomic_DNA.
DR EnsemblPlants; mRNA:HanXRQr2_Chr12g0539091; CDS:HanXRQr2_Chr12g0539091.1; HanXRQr2_Chr12g0539091.
DR Gramene; mRNA:HanXRQr2_Chr12g0539091; CDS:HanXRQr2_Chr12g0539091.1; HanXRQr2_Chr12g0539091.
DR InParanoid; A0A251T2G5; -.
DR OMA; ETFVSMH; -.
DR OrthoDB; 348565at2759; -.
DR Proteomes; UP000215914; Chromosome 12.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 8.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 8.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000215914};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 109..139
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 140..175
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 242..272
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 273..307
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 343..377
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 475..505
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 506..540
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 607..641
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 837..906
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 906 AA; 101838 MW; 1A9F14B37C32351E CRC64;
MITSLSTSCH PFCIIRRLFS THRKNLSRNI PPYENPDRSY MELSQKFYES MKTCANVQSR
PLARALHCQL ITTGLDVSTF VRNNLINMYS GCGLIDDASL VFNEIELKNV FSWNTMIEGF
MCSGRVLDAE KVFDEMPQRD VVSWNSMMSG YFRNGLLEKT VEVFVSMIRR FDCVPDAYSF
SCVMKACAGI KNVNLAKQVH GLAKKFEFLG DDSVESSMVD MYIKCDMPDV AESIFVKMKN
PNMFSWNSMI YGYSKLYGAQ SALKLFDQMP KRDVVSWNMI ISILSKHGNV MKTLDMFIEM
CRQGFRPNSM TYASVLSAST SIYELTWGAH LHARIIRLHQ NIDVYVGSGL IDLYAKCGRF
EKARKVFKEI KDHNVVSWTS LIGGAVHCGN EADAFSLFKQ MKEVPVASDQ FTLATVLGAC
CALKDLNPGT QIHAYSIRIG MDPSIPVANA LITMYAKCSD IRSANSVFES MSHRDIISWT
TMITSFSQNG NIEKARKYFD KMPERNVVSW NSMLAGYVNH GFWEDGLKIY VLMRQQGVKP
DCITFVSSIG ACANAAVQNL GTQIVCQAEK FGFGSDISVK NSIITMYSKC GRINDAEKTF
DSIATKNLIS WNAMMAGYAQ SGHGNQVIDT FEKMIGSGMI PDHISYVSVL SGCSHAGLVS
EGQRYFDMLI NDHEIIPTCE HYACVVDLYG RAGLVDKAKD LIDEMPMEPN AAVWGALLGA
CRIHRNSTMA ETALKNLVEL DAEDSGSYVL LANLYTDSGN LENVSNVRRI MKDKGIRKNP
GCSWIEVDNR VHVFTVDDTN HPRINDVYNA LREIIRKIEE TGMYVKEDGF GSKDSAYHSE
KLALAFGLMS LPAWMPIHIM KNLRICDDCH LVMKLASRVT SRELVIRDAN RFHRFKDGGC
SCRDYW
//
