ID A0A251UB16_HELAN Unreviewed; 648 AA.
AC A0A251UB16;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Putative editing factor {ECO:0000313|EMBL:OTG20550.1};
DE SubName: Full=Tetratricopeptide-like helical domain superfamily {ECO:0000313|EMBL:KAF5799156.1};
GN ORFNames=HannXRQ_Chr07g0194361 {ECO:0000313|EMBL:OTG20550.1},
GN HanXRQr2_Chr07g0301341 {ECO:0000313|EMBL:KAF5799156.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTG20550.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|EMBL:KAF5799156.1, ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5799156.1};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
RN [2] {ECO:0000313|EMBL:OTG20550.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaves {ECO:0000313|EMBL:OTG20550.1};
RA Langlade N., Munos S.;
RT "Sunflower complete genome.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAF5799156.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5799156.1};
RA Gouzy J., Langlade N., Munos S.;
RT "Helianthus annuus Genome sequencing and assembly Release 2.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; MNCJ02000322; KAF5799156.1; -; Genomic_DNA.
DR EMBL; CM007896; OTG20550.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251UB16; -.
DR STRING; 4232.A0A251UB16; -.
DR EnsemblPlants; mRNA:HanXRQr2_Chr07g0301341; CDS:HanXRQr2_Chr07g0301341.1; HanXRQr2_Chr07g0301341.
DR Gramene; mRNA:HanXRQr2_Chr07g0301341; CDS:HanXRQr2_Chr07g0301341.1; HanXRQr2_Chr07g0301341.
DR InParanoid; A0A251UB16; -.
DR OMA; KVHVFIS; -.
DR OrthoDB; 1129877at2759; -.
DR Proteomes; UP000215914; Chromosome 7.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 10.
DR PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 7.
DR Pfam; PF12854; PPR_1; 3.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 7.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000215914};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 68..102
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 130..164
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 229..259
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 271..305
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 333..367
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 433..463
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 465..499
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 648 AA; 73513 MW; 32F9646E914876DA CRC64;
MVIAWARLIR ISITNLSPHL HLYTRSYSKT SPETASNIRT LNNKLTHLIR NSKLDEARSL
FNSSKQRNTI TWNSMLSGYV RRGDITKARQ LFDEMPERDT VSWNTMISGY VGCGCIEEGK
VLFEVMRCRD IVSWNTVISG YAKNGRMDDA LRLFDQAPVK NVVTWNAMVT GFLQNGELGK
AVWFFKKMPE RDAASVSALV SGLIRNGELD KAGKILLEVS CENDDRLDMV HAYNTLIAGY
GQRGRVEDAR RLFDQIPYQQ DRNRSVRFKR NVVSWNSMIM CYVKAKDILS ARILFEEMME
RDTCSWNTMI SGYIDVSDME EASKLFREMP NPDVYSWNSM ISGYAQMGKV EKAHEFFEKM
PERNRVSWNS MIAACEKNKR YKTAVELFIK MQLDGEKPDR HTLSSLLSAC AEIVDIKLGT
QIHQQVIKIV VPDVPLNNSL ITMYARCGAI TEARAIFEEM ESRKDVISWN AMISGYASHG
YANKALELFG VMKELSIKPT YITFISVLNA CANTGLADQG RMHFKSMVND YGIEPRVEHY
ATLVDIVGRS GQLDEAMDVI KGMPIEPDKA VWGALLGACK VHNNIKLARV AAEALIRLEP
ESSTAYVLLH NMYVDIGQWD DATEIRMLME KHNIRKAAGY SLVDSSSR
//
