ID A0A251UK91_HELAN Unreviewed; 1000 AA.
AC A0A251UK91;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=Putative tRNA wybutosine-synthesizing protein {ECO:0000313|EMBL:OTG23790.1};
DE SubName: Full=Transferase {ECO:0000313|EMBL:KAF5804117.1};
DE EC=2.-.-.- {ECO:0000313|EMBL:KAF5804117.1};
GN ORFNames=HannXRQ_Chr05g0129541 {ECO:0000313|EMBL:OTG23790.1},
GN HannXRQ_Chr05g0129551 {ECO:0000313|EMBL:OTG23791.1},
GN HanXRQr2_Chr05g0193451 {ECO:0000313|EMBL:KAF5804117.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTG23790.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|EMBL:KAF5804117.1, ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5804117.1};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
RN [2] {ECO:0000313|EMBL:OTG23790.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaves {ECO:0000313|EMBL:OTG23790.1};
RA Langlade N., Munos S.;
RT "Sunflower complete genome.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAF5804117.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5804117.1};
RA Gouzy J., Langlade N., Munos S.;
RT "Helianthus annuus Genome sequencing and assembly Release 2.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=4-demethyl-7-[(3S)-3-amino-3-carboxypropyl]wyosine(37) in
CC tRNA(Phe) + S-adenosyl-L-methionine = 7-[(3S)-3-amino-3-
CC carboxypropyl]wyosine(37) in tRNA(Phe) + H(+) + S-adenosyl-L-
CC homocysteine; Xref=Rhea:RHEA:36635, Rhea:RHEA-COMP:10378, Rhea:RHEA-
CC COMP:10379, ChEBI:CHEBI:15378, ChEBI:CHEBI:57856, ChEBI:CHEBI:59789,
CC ChEBI:CHEBI:73543, ChEBI:CHEBI:73550; EC=2.1.1.282;
CC Evidence={ECO:0000256|ARBA:ARBA00001168};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=4-demethylwyosine(37) in tRNA(Phe) + S-adenosyl-L-methionine =
CC 4-demethyl-7-[(3S)-3-amino-3-carboxypropyl]wyosine(37) in tRNA(Phe) +
CC H(+) + S-methyl-5'-thioadenosine; Xref=Rhea:RHEA:36355, Rhea:RHEA-
CC COMP:10164, Rhea:RHEA-COMP:10378, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:17509, ChEBI:CHEBI:59789, ChEBI:CHEBI:64315,
CC ChEBI:CHEBI:73550; EC=2.5.1.114;
CC Evidence={ECO:0000256|ARBA:ARBA00036405};
CC -!- PATHWAY: tRNA modification; wybutosine-tRNA(Phe) biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004797}.
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DR EMBL; MNCJ02000320; KAF5804117.1; -; Genomic_DNA.
DR EMBL; CM007894; OTG23790.1; -; Genomic_DNA.
DR EMBL; CM007894; OTG23791.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251UK91; -.
DR STRING; 4232.A0A251UK91; -.
DR EnsemblPlants; mRNA:HanXRQr2_Chr05g0193451; mRNA:HanXRQr2_Chr05g0193451; HanXRQr2_Chr05g0193451.
DR Gramene; mRNA:HanXRQr2_Chr05g0193451; mRNA:HanXRQr2_Chr05g0193451; HanXRQr2_Chr05g0193451.
DR OMA; AVECKDL; -.
DR OrthoDB; 122704at2759; -.
DR UniPathway; UPA00375; -.
DR Proteomes; UP000215914; Chromosome 5.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:InterPro.
DR GO; GO:0102522; F:tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0008175; F:tRNA methyltransferase activity; IBA:GO_Central.
DR GO; GO:0030488; P:tRNA methylation; IBA:GO_Central.
DR GO; GO:0031591; P:wybutosine biosynthetic process; IBA:GO_Central.
DR CDD; cd02440; AdoMet_MTases; 1.
DR Gene3D; 2.120.10.80; Kelch-type beta propeller; 2.
DR Gene3D; 3.30.300.110; Met-10+ protein-like domains; 1.
DR Gene3D; 3.30.1960.10; tRNA wybutosine-synthesizing-like; 1.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR InterPro; IPR006652; Kelch_1.
DR InterPro; IPR030382; MeTrfase_TRM5/TYW2.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR InterPro; IPR003827; tRNA_yW-synthesising.
DR InterPro; IPR036602; tRNA_yW-synthesising-like_sf.
DR PANTHER; PTHR23245; TRNA METHYLTRANSFERASE; 1.
DR PANTHER; PTHR23245:SF25; TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 2 HOMOLOG; 1.
DR Pfam; PF13415; Kelch_3; 1.
DR Pfam; PF13418; Kelch_4; 1.
DR Pfam; PF02475; Met_10; 1.
DR Pfam; PF02676; TYW3; 1.
DR SMART; SM00612; Kelch; 3.
DR SUPFAM; SSF117281; Kelch motif; 1.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR SUPFAM; SSF111278; SSo0622-like; 1.
DR PROSITE; PS51684; SAM_MT_TRM5_TYW2; 1.
PE 4: Predicted;
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603};
KW Reference proteome {ECO:0000313|Proteomes:UP000215914};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000313|EMBL:KAF5804117.1};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694}.
FT DOMAIN 738..997
FT /note="SAM-dependent methyltransferase TRM5/TYW2-type"
FT /evidence="ECO:0000259|PROSITE:PS51684"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1000 AA; 110201 MW; E29F0697AAFF7C27 CRC64;
MEFEKRKKAT LATMTSSEPD KSPKGDIDTP LIPLLQTLNS HPSYFTTSSC SGRISILSTP
TAAATTAVKK KAKGGTWVFI THEPADPFSV QNLIFPPNPT QNDIQENLVF RFEPLIIAVE
CKDVLSAQKL VSLAISCGFR ESGITNVSSK RVIVAIRCSI RLEVPLGETC KIMVSKEYLN
YLVGIANEKM EANRKRTDSF HDALLRNEFI ARPEISTGSG DCEFLNLNQD LGDKDCSMVT
AGLEDIQLTS EIKDGASNGV PELPIKPMVI TGEPVEKLHL WGHSACTLET TKNPKSVFVF
GGFGGVGRHA RRKDSWLLDS VSGQLQLVDF SSTPSPRLGH TASLAGELMF VIGGRADPGN
VLNDVWVLNT TNNDWKQVLC TGIGFPHSHR HASAVIGSSL YVFGGIQNGS ISSGMYRLDT
QNLTWEEVVV QGQIPSPRHS HTLVAHGAQL FMFGGYDGSK ALGDFYSFDI HSCTWKKEKM
VGSTPYARFS HAMFVYKNYI GVMGGCPIKQ HYQELSVLKV GSSVWKRIKL SSVGEDLFVR
STTSVVGDDL VIVGGGASCY AFGTKFSEPM KLNLLSLVSF AEPFNETEDQ SNIDLKTMVP
LRWVLRVDKK HAKPAKDILK KFGWLDAERK VYTQENGVHV CFPITKEFVA LYQNKKPDIN
GVVNEVSNLN LQEILKVVSS ARALDLLAAL GATTHADHIV KVKKASSSPL KVMKDAVASL
LNRHNLPTTL LEQLPTRWER LGDIVVLPMT SFKDSVWDTL GKELWLTVAD SLGATRLARQ
GKVSPTGTRD SGLEILVGVN GWVDHRENGV LYSFDATKCM FSWGNLSEKR RMGQLDCKQE
VIVDLFAGIG YFTLPFLVKA NAKMVYACEW NPHAIEALRR NLEANGVADR CVVLEGDNRA
TAPKGVADRV NLGLLPSSEG SWITAVKALR SEGGMMHVHG NVKDSEEDSW TEQVSKSIKE
ISRSEGYNWD VSVEHVERVK WYAPHIRHLV VDIKCKQIDS
//