ID A0A251USN3_HELAN Unreviewed; 696 AA.
AC A0A251USN3;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Putative BED zinc finger, hAT family dimerization domain protein {ECO:0000313|EMBL:OTG26358.1};
DE SubName: Full=Transcription factor/ chromatin remodeling BED-type(Zn) family {ECO:0000313|EMBL:KAF5807365.1};
GN ORFNames=HannXRQ_Chr05g0157751 {ECO:0000313|EMBL:OTG26358.1},
GN HanXRQr2_Chr05g0232831 {ECO:0000313|EMBL:KAF5807365.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTG26358.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|EMBL:KAF5807365.1, ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5807365.1};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
RN [2] {ECO:0000313|EMBL:OTG26358.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaves {ECO:0000313|EMBL:OTG26358.1};
RA Langlade N., Munos S.;
RT "Sunflower complete genome.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAF5807365.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5807365.1};
RA Gouzy J., Langlade N., Munos S.;
RT "Helianthus annuus Genome sequencing and assembly Release 2.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Homodimer. {ECO:0000256|ARBA:ARBA00011738}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; MNCJ02000320; KAF5807365.1; -; Genomic_DNA.
DR EMBL; CM007894; OTG26358.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251USN3; -.
DR STRING; 4232.A0A251USN3; -.
DR EnsemblPlants; mRNA:HanXRQr2_Chr05g0232831; mRNA:HanXRQr2_Chr05g0232831; HanXRQr2_Chr05g0232831.
DR Gramene; mRNA:HanXRQr2_Chr05g0232831; mRNA:HanXRQr2_Chr05g0232831; HanXRQr2_Chr05g0232831.
DR InParanoid; A0A251USN3; -.
DR OMA; LDICHIP; -.
DR Proteomes; UP000215914; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0009791; P:post-embryonic development; IEA:UniProt.
DR InterPro; IPR025525; hAT-like_transposase_RNase-H.
DR InterPro; IPR008906; HATC_C_dom.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR003656; Znf_BED.
DR PANTHER; PTHR46481:SF4; ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 39; 1.
DR PANTHER; PTHR46481; ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4; 1.
DR Pfam; PF05699; Dimer_Tnp_hAT; 1.
DR Pfam; PF14372; hAT-like_RNase-H; 1.
DR Pfam; PF02892; zf-BED; 1.
DR SMART; SM00614; ZnF_BED; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000215914};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 76..114
FT /note="BED-type"
FT /evidence="ECO:0000259|Pfam:PF02892"
FT DOMAIN 439..532
FT /note="hAT-like transposase RNase-H fold"
FT /evidence="ECO:0000259|Pfam:PF14372"
FT DOMAIN 579..659
FT /note="HAT C-terminal dimerisation"
FT /evidence="ECO:0000259|Pfam:PF05699"
SQ SEQUENCE 696 AA; 78962 MW; 84B16A247D3D3557 CRC64;
MQFGLQASVV GGKTGGLMDW SVNNSYKNLK DMEPKSVMDV ALIPIMEPID GAPGTSDKAD
HTTKPRKKTM TSIYLKFFET TSDGKNRKCK FCGQSYSIST ATGNLGRHLS NRHPGYDKSD
DSVSTPVSQP IVVKKPQTQA KASRVDFDHL NWLLTKWLIL ASLSPSTFEE KWLSNSFKFL
NPNVHIWSSE KFQAVLNEVF KSMREDIRCM LANVTSKVSI TLEFWTSYQQ IFYMSVSCQW
IDEQWSFHRL LLDISRVPSP YGSSEIYHTL TKVLKLYTLE SRILSCTHDN STNAFHAYHT
LKEDLASQKP NPFCYVPCAA HALSSVIDDG LRSTKSVIAK IREFALEINS SSEMIEEFNQ
STTNYQEGSW KFPLDVSARW SGTYQMLDIV RKASKTMEAI IRKHDETLGR LLLNSTEKNA
INLIHTYLEP FYKTTNDICT NKLPTVGLVL FFMDHISETI AACRESRHSP DWLKNAAIDM
GTKVRCYNDQ VSNIFTYMTA ILDPRIKIEL IPESLNLDNY LEEARSHFVR NYSTTHFSSV
ATSYGSTQEL EDGGNNNVSF AEEIARKRRR AAMGTATDEL TQYLSEPTAP IPTDVLEWWK
VNSTRYPRLS VMARDFLAVQ ATSMAPEDLF CSKGDEVERA KQSIPYSSIQ CVLCIRSWIE
SGMKLKYKST EIDYERLMEL AGVGEDVAGC SEKKHK
//
