ID A0A251V5C8_HELAN Unreviewed; 433 AA.
AC A0A251V5C8;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Putative zinc finger, RING/FYVE/PHD-type {ECO:0000313|EMBL:OTG30499.1};
DE SubName: Full=Transcription factor C2H2 family {ECO:0000313|EMBL:KAF5813848.1};
GN ORFNames=HannXRQ_Chr03g0065221 {ECO:0000313|EMBL:OTG30499.1},
GN HanXRQr2_Chr03g0103541 {ECO:0000313|EMBL:KAF5813848.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTG30499.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|EMBL:KAF5813848.1, ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5813848.1};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
RN [2] {ECO:0000313|EMBL:OTG30499.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Leaves {ECO:0000313|EMBL:OTG30499.1};
RA Langlade N., Munos S.;
RT "Sunflower complete genome.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAF5813848.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5813848.1};
RA Gouzy J., Langlade N., Munos S.;
RT "Helianthus annuus Genome sequencing and assembly Release 2.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; MNCJ02000318; KAF5813848.1; -; Genomic_DNA.
DR EMBL; CM007892; OTG30499.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251V5C8; -.
DR STRING; 4232.A0A251V5C8; -.
DR EnsemblPlants; mRNA:HanXRQr2_Chr03g0103541; mRNA:HanXRQr2_Chr03g0103541; HanXRQr2_Chr03g0103541.
DR Gramene; mRNA:HanXRQr2_Chr03g0103541; mRNA:HanXRQr2_Chr03g0103541; HanXRQr2_Chr03g0103541.
DR InParanoid; A0A251V5C8; -.
DR OMA; NCPICAR; -.
DR OrthoDB; 154493at2759; -.
DR Proteomes; UP000215914; Chromosome 3.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IEA:InterPro.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR038896; RNF170.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR22894:SF6; E3 UBIQUITIN-PROTEIN LIGASE RNF170-LIKE ISOFORM X1; 1.
DR PANTHER; PTHR22894; UNCHARACTERIZED; 1.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000215914};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT TRANSMEM 367..385
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 397..421
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 254..296
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 164..204
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 182..199
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 433 AA; 48560 MW; 23FEA922752B422E CRC64;
MITSPNNFQV RKRKWKTVLF LLRKRKRNID HHLKHPIGAE IFNGIHGGDS RRRNDAYCSG
GDERDVNPRN YVDRIFEGSG KVNPRLGLDN VDAYCSGVDA RDVNPRNDVD RKLEGFGKVN
PRSGLDNDKV VDVDVGVCCS GVDERGENPR DDVDCELEGM GKVSPRLDLD NVDDDDDANC
SGVDERGENS REDDVGWGFE GSGKENSRLG LDHVVGEEGE EEEVVVDESS KSAVMVVSER
KKDGGDTPPD DDCCPICFDS FSIACKTNCG HWFCANCILQ FWTYRTVLQK CNCPICARPI
SKLTPEASLN MMNEVEVVEV LKNVQRYNRL FQGGINGVIR KAFEVPNLFT RMLCGLMDPD
RFRGNYYAMR SFALLMSCIY NIGSFEFIPT GTLGVRRLFD LCAIALVVIL CLVGICHRLL
LRQRVRRLAA NQP
//
