ID A0A251V6I5_HELAN Unreviewed; 618 AA.
AC A0A251V6I5;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=Putative basic helix-loop-helix (BHLH) DNA-binding superfamily protein {ECO:0000313|EMBL:OTG31044.1};
GN Name=AMS {ECO:0000313|EMBL:OTG31044.1};
GN ORFNames=HannXRQ_Chr03g0071131 {ECO:0000313|EMBL:OTG31044.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTG31044.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM007892; OTG31044.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251V6I5; -.
DR STRING; 4232.A0A251V6I5; -.
DR EnsemblPlants; mRNA:HanXRQr2_Chr04g0167361; mRNA:HanXRQr2_Chr04g0167361; HanXRQr2_Chr04g0167361.
DR Gramene; mRNA:HanXRQr2_Chr04g0167361; mRNA:HanXRQr2_Chr04g0167361; HanXRQr2_Chr04g0167361.
DR InParanoid; A0A251V6I5; -.
DR OMA; GWPETST; -.
DR OrthoDB; 1213809at2759; -.
DR Proteomes; UP000215914; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003682; F:chromatin binding; IEA:EnsemblPlants.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IEA:EnsemblPlants.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0048658; P:anther wall tapetum development; IEA:EnsemblPlants.
DR GO; GO:0009555; P:pollen development; IEA:EnsemblPlants.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR CDD; cd11443; bHLH_AtAMS_like; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR025610; MYC/MYB_N.
DR PANTHER; PTHR31945:SF11; TRANSCRIPTION FACTOR ABORTED MICROSPORES; 1.
DR PANTHER; PTHR31945; TRANSCRIPTION FACTOR SCREAM2-RELATED; 1.
DR Pfam; PF14215; bHLH-MYC_N; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000313|EMBL:OTG31044.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000215914};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 348..397
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT REGION 297..359
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 565..606
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 387..421
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 297..328
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 336..359
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 586..602
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 618 AA; 70506 MW; DECFBFAA3D2F2164 CRC64;
MQVWKMEVIQ EMMERLRSIV GPESWDYCVF WKPCKDQRVI EWVDCCCSGS NVRHMNGNGG
EHDQQLLFQC KDVAFHHPTT DACHLLSLLP PSMPFDSGIY GQTMISNQPR WLNFSNSSDS
NFCEENLGTK ALIPVSIGLV ELFVSKQIAE DQSIVAFVTD VFSKSLEQHS MLNTSNNVAS
SFSVNMDGLE DGESKDYIAQ VLDDHKDPCN NFQPPISPAT ILENLNLSPH NISDNHMHPM
NFLQHFNYGE NRSAKNMFLE GTREPMMMNH DDPFDPSLED NGGFDHEIDM ALQGQMMSDS
NNKGHLMDPL ENNSKKQGND VNRSDSVSDC SDQNDDDDDP KCRRRNGKPQ SKNLIAERRR
RKKLNDRLYT LRSLVPKITK LDRASILKDA IEYVMELKRQ VEDLQNELEE NSDDEDTTNN
ESTIVEQEVM HGNGSKQKRR YSQGHGMFMN GPQPEAYSVI GNNEVTKHNP DVDGASEKGQ
QMEPQVEVAS LDGNEFFVKV FREHKPGGFV RLMEAFNSLG LEVTNVNVTS FRCLVLNVFK
VERKDSEMVQ ADHVRESLLE ITRNPSKGWP ETSTKASENG HGMMDHHHHN HNHHHHSHLH
NNQPKPQYHF NAMYQVLN
//
