ID A0A251VDS1_HELAN Unreviewed; 849 AA.
AC A0A251VDS1;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN Name=SDE3 {ECO:0000313|EMBL:OTG33296.1};
GN ORFNames=HannXRQ_Chr02g0033141 {ECO:0000313|EMBL:OTG33296.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTG33296.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
CC -!- SIMILARITY: Belongs to the DNA2/NAM7 helicase family. SDE3 subfamily.
CC {ECO:0000256|ARBA:ARBA00005601}.
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DR EMBL; CM007891; OTG33296.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251VDS1; -.
DR STRING; 4232.A0A251VDS1; -.
DR EnsemblPlants; mRNA:HanXRQr2_Chr07g0287571; mRNA:HanXRQr2_Chr07g0287571; HanXRQr2_Chr07g0287571.
DR Gramene; mRNA:HanXRQr2_Chr07g0287571; mRNA:HanXRQr2_Chr07g0287571; HanXRQr2_Chr07g0287571.
DR InParanoid; A0A251VDS1; -.
DR OMA; NDWDQDQ; -.
DR Proteomes; UP000215914; Chromosome 2.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0043186; C:P granule; IBA:GO_Central.
DR GO; GO:0032574; F:5'-3' RNA helicase activity; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0035194; P:regulatory ncRNA-mediated post-transcriptional gene silencing; IBA:GO_Central.
DR CDD; cd18038; DEXXQc_Helz-like; 1.
DR CDD; cd18808; SF1_C_Upf1; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR InterPro; IPR049080; MOV-10-like_beta-barrel.
DR InterPro; IPR026122; MOV-10/SDE3_DEXXQ/H-box.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR047187; SF1_C_Upf1.
DR PANTHER; PTHR10887; DNA2/NAM7 HELICASE FAMILY; 1.
DR PANTHER; PTHR10887:SF322; RNA HELICASE MOV10L1; 1.
DR Pfam; PF13086; AAA_11; 2.
DR Pfam; PF13087; AAA_12; 1.
DR Pfam; PF21634; MOV-10_beta-barrel; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Hydrolase {ECO:0000313|EMBL:OTG33296.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000215914}.
FT DOMAIN 179..263
FT /note="Helicase MOV-10-like beta-barrel"
FT /evidence="ECO:0000259|Pfam:PF21634"
FT DOMAIN 310..407
FT /note="DNA2/NAM7 helicase helicase"
FT /evidence="ECO:0000259|Pfam:PF13086"
FT DOMAIN 431..501
FT /note="DNA2/NAM7 helicase helicase"
FT /evidence="ECO:0000259|Pfam:PF13086"
FT DOMAIN 509..712
FT /note="DNA2/NAM7 helicase-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13087"
FT REGION 779..849
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 801..823
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 832..849
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 849 AA; 96588 MW; E867B6EF8B90C1E5 CRC64;
MEPPSPNSDE EYIKSFVESF SMEDRMLVPG KTLTIWLSCK AKVKGLHTTA VHFNVDDDRI
ERMGFIMVED KISRSLTSNK PYSRPARNNK PLIPRIFSPN RNNVGVKVIR GSRPAKGNSR
AYKYKLPEYP IPQAIREVIE SKGTPESLIE GLTMKNYVPF FRTLIIMEEI KLEDDMRTYD
MQNVTFKRKG VFLTLEVPGL AERRPSIARG DLIIAKSVSH NEQNVPPLYK GYIFRVEAEQ
VLISFHEDVH SYHSEGDLYD VQFEYNRLGM RRLYQALEAS GKLDAEFLFP EFSSNQRCID
TRPLVPFSCN LNEEQLSSIE MILGCKGGPP YVVHGPPGTG KSVTLTEAIL QLYKNQRSSI
ILVCAPSNSA ADHLLARLVC ENAVNIRKQD ILRLNASARP IDDIKSEFLD FCSIDEEEMA
FSCPIFEQLI RYRIIVSTYA SAALLYAEGL KTGHFTHIFL DEAAQASEPE TMIPISHFYR
RNTVVVLAGD PVQLGPVIFS KDAESYGLGK SFMERLCESK FYKDGDQNYV TKLVRNYRCH
QHILSLPSEL FYKGELVACK EDDTLYPLTW KDYIKNPEFP VLFLGVQGVD EREGNNPSWF
NRIEASEVVE VIINLKDRGI KNEDIGVITP YRQQVLKISK ALEEFVGSEI KVGTVESFQG
QEREVIIVST VRSTIKHNET DKRHCLGFLS NPRRFNVAIT RARSLLIAIG NPHIICKDEH
WNKLLWHCVD NDSYNGCFLP EKEEVVEAES ESYNWNSGGN QTSCGNWNEI KEGEAYNCGE
ESTWEPTGDW ENDNSNNNDH GDWENDNGNN NNNNDNNDWG PTGEWENGND WGVPENSATT
SKQNDYSGW
//
