ID A0A251VFU7_HELAN Unreviewed; 589 AA.
AC A0A251VFU7;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Putative reverse transcriptase domain, Ribonuclease H-like domain protein {ECO:0000313|EMBL:OTG34294.1};
GN ORFNames=HannXRQ_Chr02g0044171 {ECO:0000313|EMBL:OTG34294.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTG34294.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
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DR EMBL; CM007891; OTG34294.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251VFU7; -.
DR STRING; 4232.A0A251VFU7; -.
DR EnsemblPlants; mRNA:HanXRQr2_Chr02g0063421; CDS:HanXRQr2_Chr02g0063421.1; HanXRQr2_Chr02g0063421.
DR Gramene; mRNA:HanXRQr2_Chr02g0063421; CDS:HanXRQr2_Chr02g0063421.1; HanXRQr2_Chr02g0063421.
DR InParanoid; A0A251VFU7; -.
DR OMA; CITEKEC; -.
DR Proteomes; UP000215914; Chromosome 2.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR24559:SF437; RIBONUCLEASE H; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotidyltransferase {ECO:0000313|EMBL:OTG34294.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000215914};
KW RNA-directed DNA polymerase {ECO:0000313|EMBL:OTG34294.1};
KW Transferase {ECO:0000313|EMBL:OTG34294.1}.
FT DOMAIN 384..513
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
SQ SEQUENCE 589 AA; 67104 MW; 8E5E3FF98DBF2DC6 CRC64;
MCIDFKDLNK ACPKDCYPLP EIDLKVDSLT RYPFKCFLDA YKGYHQILMK KEDEEKTAFH
TDKGIFCYQK MPFVLKNAGA TYQRLVDKAF EEQIGRNMEA YVDDLVIKSK TEYQMLDDIQ
ETFKNLRKIN MKLNPEKCSF GFDEGKFLGH IVGKQSIKAN PNKVKAVLEA KPPRTKKEVE
SLNGKLAALK RFTSKLAERS LPFYKTLKNC SDKKDFRWTD EAEEAFNQMK QHLASLPDIA
TPETGELISV YLSVADEAIS AALTIERDKA QVPVYFFSKT LKLAETKYPP LEKLALALVQ
TARRLRRYFQ AHPIQVVTDQ PVKNVLEKPE NSGRLAKWAV ELGEHNITYV PRKAIKAQVL
ADFLVEVPSQ TIEEVNTTTA EPSNPEAWKL FTDGASSVEG SGAGLVLINP EGLEFTYALR
FNFQTTNNEA EYEALIAGLR LAKEMKVKKL EVFTDSLLVS SQVNDSYVAK EPNMRKYKEK
SKELMNTFQA CNIKQIPRSQ NKKADALSKL ASLTFAHLTK KVLVEVLKAR SIDELEVQDV
VTEEDPNWMT PIKKFLQDNE LPNDQTEAER VKIKARQYVL QGEILYKKG
//
