ID A0A251VSN6_HELAN Unreviewed; 647 AA.
AC A0A251VSN6;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Putative tetratricopeptide repeat (TPR)-like superfamily protein {ECO:0000313|EMBL:OTG38575.1};
GN ORFNames=HannXRQ_Chr01g0031151 {ECO:0000313|EMBL:OTG38575.1};
OS Helianthus annuus (Common sunflower).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae;
OC Heliantheae alliance; Heliantheae; Helianthus.
OX NCBI_TaxID=4232 {ECO:0000313|EMBL:OTG38575.1, ECO:0000313|Proteomes:UP000215914};
RN [1] {ECO:0000313|Proteomes:UP000215914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SF193 {ECO:0000313|Proteomes:UP000215914};
RX PubMed=28538728; DOI=10.1038/nature22380;
RA Badouin H., Gouzy J., Grassa C.J., Murat F., Staton S.E., Cottret L.,
RA Lelandais-Briere C., Owens G.L., Carrere S., Mayjonade B., Legrand L.,
RA Gill N., Kane N.C., Bowers J.E., Hubner S., Bellec A., Berard A.,
RA Berges H., Blanchet N., Boniface M.C., Brunel D., Catrice O., Chaidir N.,
RA Claudel C., Donnadieu C., Faraut T., Fievet G., Helmstetter N., King M.,
RA Knapp S.J., Lai Z., Le Paslier M.C., Lippi Y., Lorenzon L., Mandel J.R.,
RA Marage G., Marchand G., Marquand E., Bret-Mestries E., Morien E.,
RA Nambeesan S., Nguyen T., Pegot-Espagnet P., Pouilly N., Raftis F.,
RA Sallet E., Schiex T., Thomas J., Vandecasteele C., Vares D., Vear F.,
RA Vautrin S., Crespi M., Mangin B., Burke J.M., Salse J., Munos S.,
RA Vincourt P., Rieseberg L.H., Langlade N.B.;
RT "The sunflower genome provides insights into oil metabolism, flowering and
RT Asterid evolution.";
RL Nature 546:148-152(2017).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CM007890; OTG38575.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A251VSN6; -.
DR EnsemblPlants; mRNA:HanXRQr2_Chr01g0045551; CDS:HanXRQr2_Chr01g0045551.1; HanXRQr2_Chr01g0045551.
DR Gramene; mRNA:HanXRQr2_Chr01g0045551; CDS:HanXRQr2_Chr01g0045551.1; HanXRQr2_Chr01g0045551.
DR InParanoid; A0A251VSN6; -.
DR OMA; FFNVMIR; -.
DR Proteomes; UP000215914; Chromosome 1.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR24015:SF1832; OS03G0241800 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 5.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000215914};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 68..102
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 169..204
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 239..273
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 309..339
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 340..374
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 555..647
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 647 AA; 72830 MW; 41132C97F0346B05 CRC64;
MSLTEHFCLK ILDKCPDIQQ LRRIHCRLII AGNLASASHV ALKLMKAYSE CRQITVTRQL
FDEFPQKDVV FFNVMIRSYV NNKLFERALH MYRSMNRIHI FPDHFTVPQV LKACSGSENL
WVGLQTHVSV FKKGLHSNLY VGNGLITMYG KCNRLLEARK VFDEMPGRDV VSWNSLVAAY
AQNGMFHDAL EVCRTMVHSS SLKPNAGTMA SLSPAVTCST SSDNLIFMKE MFMNHARDSL
VSWNVMIAVY VNNSMPADAV NLYLEMESCG VDPDSITVAS VLPACGDLSA LSLGRKIHEY
VKRKRLLPNL TLENALIDMY AKCGSLHDAR KVFDEMQTRD VVSWTSMVSA YGMTGDGQTA
VTIFSDMQRS GLTPDSISFV PVLSACSHAG LLDQGKRFFK LMTDEYKIVP RLEHFACMVD
LLGRSGRINE AYEFVKNMKM EPNDRIWGAL LSACKVHSNT DIGLVAADHL FQLVPEQAGY
YVLLSNIYAK AGRWKDVTTI RSSMKVKGVK KEPGVSNVEL NNQVHSFLAG DQSHPQSKQI
YEELDIIVGK MRELGYVPET DSALHDIEDE DKGNHLAVHS EKLAIVFVII NTEPFTPIRI
TKNLRVCEDC HIAAKLISKI AEREIILRDT NRFHHFKNGF CSCGDYW
//
