ID A0A254R9Z9_9RHOB Unreviewed; 405 AA.
AC A0A254R9Z9;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE SubName: Full=RNA methyltransferase {ECO:0000313|EMBL:OWU86758.1};
GN ORFNames=ATO6_03810 {ECO:0000313|EMBL:OWU86758.1};
OS Oceanicola sp. 22II-s10i.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Oceanicola.
OX NCBI_TaxID=1317116 {ECO:0000313|EMBL:OWU86758.1, ECO:0000313|Proteomes:UP000197567};
RN [1] {ECO:0000313|EMBL:OWU86758.1, ECO:0000313|Proteomes:UP000197567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=22II-s10i {ECO:0000313|EMBL:OWU86758.1,
RC ECO:0000313|Proteomes:UP000197567};
RA Lai Q., Li G., Shao Z.;
RT "Oceanicola sp. 22II-s10i Genome Sequencing.";
RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC superfamily. RNA M5U methyltransferase family. {ECO:0000256|PROSITE-
CC ProRule:PRU01024}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OWU86758.1}.
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DR EMBL; AQQU01000001; OWU86758.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A254R9Z9; -.
DR OrthoDB; 9804590at2; -.
DR Proteomes; UP000197567; Unassembled WGS sequence.
DR GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd02440; AdoMet_MTases; 1.
DR Gene3D; 2.40.50.1070; -; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR InterPro; IPR030390; MeTrfase_TrmA_AS.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR InterPro; IPR010280; U5_MeTrfase_fam.
DR PANTHER; PTHR11061; RNA M5U METHYLTRANSFERASE; 1.
DR PANTHER; PTHR11061:SF30; TRNA (URACIL(54)-C(5))-METHYLTRANSFERASE; 1.
DR Pfam; PF05958; tRNA_U5-meth_tr; 1.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR PROSITE; PS51687; SAM_MT_RNA_M5U; 1.
DR PROSITE; PS01230; TRMA_1; 1.
PE 3: Inferred from homology;
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603, ECO:0000256|PROSITE-
KW ProRule:PRU01024}; Reference proteome {ECO:0000313|Proteomes:UP000197567};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691,
KW ECO:0000256|PROSITE-ProRule:PRU01024};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|PROSITE-
KW ProRule:PRU01024}.
FT ACT_SITE 362
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU10015"
FT ACT_SITE 362
FT /note="Nucleophile"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT BINDING 241
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT BINDING 268
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT BINDING 288
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT BINDING 336
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
SQ SEQUENCE 405 AA; 42562 MW; 5692653F3B33F338 CRC64;
METYRIERLG QHGDGIAPGP VFAPLTLPGE EVTGRLDGQR LEEVKIVTPS AERISAPCRH
FRTCGGCSLQ HAAPEFIAGW KADVVRQALS AQGISGEIGS VHTSPARSRR RATLSVRRTK
KGAMAGFHAR GSDVIVEIPD CHLLHPDLMA ALPVAEALAV AGGSRKGELS VAATLSLSGL
DVAVTGGKPL DGPLRIALAA EAERLGLARL AWDDEVVAMA HPPVQVFGRV RVVPPPGAFL
QATADGEAAL LAAVSALVQG KTAIADLFAG CGTFSLPMAE GAEVHAVEGD AAMLDALDKG
WRQAQGLKRV THEARDLFRR PLMPDELKRF DAVVIDPPRA GAQAQVAEIA KARVPMVAHV
SCNPATFARE AAVLIAAGYD MGPVTVVDQF RWSGHVELVA GFTMA
//