ID A0A255ZFC7_9BURK Unreviewed; 471 AA.
AC A0A255ZFC7;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=Excinuclease cho {ECO:0000256|ARBA:ARBA00040756};
DE AltName: Full=Endonuclease cho {ECO:0000256|ARBA:ARBA00042732};
DE AltName: Full=UvrC homolog protein {ECO:0000256|ARBA:ARBA00042138};
GN ORFNames=CHU94_13250 {ECO:0000313|EMBL:OYQ40263.1};
OS Rhodoferax sp. TH121.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Rhodoferax.
OX NCBI_TaxID=2022803 {ECO:0000313|EMBL:OYQ40263.1, ECO:0000313|Proteomes:UP000216607};
RN [1] {ECO:0000313|EMBL:OYQ40263.1, ECO:0000313|Proteomes:UP000216607}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TH121 {ECO:0000313|EMBL:OYQ40263.1,
RC ECO:0000313|Proteomes:UP000216607};
RA Cai H.;
RT "Rhodoferax cyanobacteriorum sp. nov., isolated from cyanobacterial
RT aggregates in a eutrophic lake.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OYQ40263.1}.
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DR EMBL; NOXW01000021; OYQ40263.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A255ZFC7; -.
DR OrthoDB; 9803913at2; -.
DR Proteomes; UP000216607; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProt.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR CDD; cd10434; GIY-YIG_UvrC_Cho; 1.
DR Gene3D; 3.40.1440.10; GIY-YIG endonuclease; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR047296; GIY-YIG_UvrC_Cho.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30562:SF10; EXCINUCLEASE CHO; 1.
DR PANTHER; PTHR30562; UVRC/OXIDOREDUCTASE; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF82771; GIY-YIG endonuclease; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000216607}.
FT DOMAIN 199..277
FT /note="GIY-YIG"
FT /evidence="ECO:0000259|PROSITE:PS50164"
SQ SEQUENCE 471 AA; 52576 MW; ABD3072977F72ECD CRC64;
MLPCFVMLDL ETTGGSAVHD RITEIAAVRV ENGVEVARWS TLVNPGVSIP PFIQSLTGIT
DAMVEDAPTF AQVAPRLLEL LDGAVFVAHN VRFDHGFVVN ELARLEKPLK IKTLCTVRLS
RKLYPQHKGH GLDAIMQRHG LHTLARHRAM GDVEVVLQWL QLAQAELGAE VLQREAKTLL
QGSASLPPLL ETPMEDIPDT PGVYLFYGEG SIPLYVGKSV NMRTRVLSHF QSASKVAREM
RILQEIRRVE WRETAGELGA LLLESRLVKE LQPLHNRQLR KERQLSAWML HAQADARPLV
QLVRMDDVDA TAMGQLYGTY RSKRQAMDAL RLLADTHQLC PQALGLESGK GACFAHQIGR
CKGVCAGHEP AALHRVRLEM AMAQHRLQAW PHPGRVGVRE HHAASGRTDI HVFDRWCHVA
TVHDEVSLAD VQQSRQQVLA FDLDTYRLLL KRLAPPLGRE RAVFHLPGLS S
//
