ID A0A255ZIV6_9BURK Unreviewed; 780 AA.
AC A0A255ZIV6;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 14.
DE SubName: Full=GGDEF domain-containing protein {ECO:0000313|EMBL:OYQ40540.1};
GN ORFNames=CHU94_13955 {ECO:0000313|EMBL:OYQ40540.1};
OS Rhodoferax sp. TH121.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Rhodoferax.
OX NCBI_TaxID=2022803 {ECO:0000313|EMBL:OYQ40540.1, ECO:0000313|Proteomes:UP000216607};
RN [1] {ECO:0000313|EMBL:OYQ40540.1, ECO:0000313|Proteomes:UP000216607}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TH121 {ECO:0000313|EMBL:OYQ40540.1,
RC ECO:0000313|Proteomes:UP000216607};
RA Cai H.;
RT "Rhodoferax cyanobacteriorum sp. nov., isolated from cyanobacterial
RT aggregates in a eutrophic lake.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OYQ40540.1}.
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DR EMBL; NOXW01000021; OYQ40540.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A255ZIV6; -.
DR OrthoDB; 9813903at2; -.
DR Proteomes; UP000216607; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd06225; HAMP; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 6.10.340.10; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR InterPro; IPR029150; dCache_3.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR003660; HAMP_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF71; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR Pfam; PF14827; dCache_3; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00672; HAMP; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00304; HAMP; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF158472; HAMP domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50885; HAMP; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000216607};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 268..289
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 290..343
FT /note="HAMP"
FT /evidence="ECO:0000259|PROSITE:PS50885"
FT DOMAIN 382..514
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 523..776
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 780 AA; 85190 MW; D8862821FA78A800 CRC64;
MFRFYAHWGI GTKFLVLSVA LLLLVQIAVY SVVRTSISSN VRAQLAQELA IGDKVWWRLL
DQNAQKLRQG AAVLAADFGF RSALSSGDTE TLRSALENSG ARIGAPITAL LDTGFALQAA
GFEMGGQEAL TPVLQQVAAE LSQTEQSSQL QLINTTLYQF VMVPLKAPLT IGWVLMGFPI
EQSQANDMFG LSSIHVALVK PQGGIVLSSI PAKEQAALQQ LGQGAELQVP EGTLVVRRSS
ERTDVKAVET YLLRSLDEVV APYLQVQIAL LGITALGLAL FVVGSATLAR RITTPLRSLV
GAADQLSRGE YDHKLPALRH KDEIGDLARA FDHMRSSIRK QQGEILQLAY WDRLTALPNR
TQFRDLLQQS IRASIAMEAA APPVAVVLLN LDRFKHVNDV LGYAFGDGLL VAVAQRLSAL
ISAELGVVAR MGGDEFAVLI EGSTAEEAIA VAQKIAASFD QPLTLEDQTV DFSAGIGVAS
WPAHAQDADT LLSRAEIAMY VAKQKTTGIQ VYDPALDSSS TQTLSLLTEL RHAVDEGQLR
LYLQPKLNLA DNTVLAAEAL VRWQHPLRGL VPPMQFIPFA EQTGFVRQLT LWMFEEVARE
LPTLRADGRP LRVAINLSTR DLLDQDFPAK LDAMMAKYKA PTDAFCLEIT ESAIMDDPQR
AEATLNRLAE RGFKLSIDDF GTGYSSLAYL KRLPVNELKI DKSFVMGMEK DESDAKIVRS
TIDLAHNLGL SVVAEGVENQ AILDQLRTLS CDEAQGYYLS KPIPLNDFIA WRARYQATAA
//
