ID A0A257IYW6_9BACT Unreviewed; 708 AA.
AC A0A257IYW6;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 24-JAN-2024, entry version 13.
DE SubName: Full=RNA-binding transcriptional accessory protein {ECO:0000313|EMBL:OYU67988.1};
GN ORFNames=CFE22_01365 {ECO:0000313|EMBL:OYU67988.1};
OS Cytophagaceae bacterium BCCC1.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae.
OX NCBI_TaxID=2015573 {ECO:0000313|EMBL:OYU67988.1, ECO:0000313|Proteomes:UP000215757};
RN [1] {ECO:0000313|EMBL:OYU67988.1, ECO:0000313|Proteomes:UP000215757}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BCCC1 {ECO:0000313|EMBL:OYU67988.1};
RA Kojadinovic M., Villain A., Puppo C., Fon Sing S., Prioretti L., Hubert P.,
RA Gregori G., Zhang Y., Sassi J.-F., Claverie J.-M., Blanc G., Gontero B.;
RT "A metagenomic investigation of the 'star' freshwater diatom Asterionella
RT formosa and its bacterial cohort.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OYU67988.1}.
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DR EMBL; NKJF01000002; OYU67988.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A257IYW6; -.
DR Proteomes; UP000215757; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000215757}.
FT DOMAIN 637..706
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 708 AA; 79674 MW; 3E77CD5CB27415EB CRC64;
MTQKQIQYTS ETLKLRSSQI TKTVELLVDG ATVPFIARYR KEVTESLNEV EILDIKKLHE
KFLEADKRRE AILKSIQEQG KLTPELENSL KNTLFVNELE DIYLPYKQKK KTRATIAIEN
GLEPLAKIIF GQKDRDIETI GKKYISEKVK NTAEALAGAR DIIAEWINED IDARNKIRTV
FEKSGILTSK LKKGKESEAV KYKDYFDYSE AGRSIPSHRY LAIRRGEEEG FLKVSIDIEL
EYAIDLLERI YLQGFTEPKQ QVGMAIEDSL KRLLLPSLEK EFENKLKEKA DLAAIQIFTG
NLRQLLLSAP LGQKRVLSID PGIRTGCKTV VLNELGDLIE DLVIFPLTKQ QESAAIIRSL
IEKHNIEAIA IGNGTASRET ESFVKNALSS FEKGKSVMTV VVSEQGASIY SASEIAREEF
PNKDLTVRGA VSIGRRLMDP LAELVKIDPK SIGVGQYQHD VDQKYLKESL DVTVESCVNL
VGVELNTASK HLLSYVSGIG PSIAQNIIDY RTKNGKFKSR KDLKLVPRLG EKAFEQAAGF
LRIHGAENPL DNSAVHPESY HLVEKMAKNL NTTLKQLIEN QNLQKSIDPK QYVSKEVGLP
TLNDILNELK KPGRDPREQL ESFEFGNVND IKDLRTNMVL PGIVTNITAF GCFVDIGVHQ
DGLIHLSNMA NRFIKDPNEV VKVHQKVIVK VIEVDIQRKR IALSMKDV
//
