ID A0A260ZXV4_9PELO Unreviewed; 656 AA.
AC A0A260ZXV4;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=60S ribosome subunit biogenesis protein NIP7 homolog {ECO:0000256|ARBA:ARBA00018162};
DE Flags: Fragment;
GN ORFNames=FL83_21922 {ECO:0000313|EMBL:OZF90427.1};
OS Caenorhabditis latens.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=1503980 {ECO:0000313|EMBL:OZF90427.1, ECO:0000313|Proteomes:UP000216463};
RN [1] {ECO:0000313|EMBL:OZF90427.1, ECO:0000313|Proteomes:UP000216463}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PX534 {ECO:0000313|EMBL:OZF90427.1,
RC ECO:0000313|Proteomes:UP000216463};
RA Fierst J.L.;
RT "Caenorhabditis latens genome sequence.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for proper 34S pre-rRNA processing and 60S ribosome
CC subunit assembly. {ECO:0000256|ARBA:ARBA00004087}.
CC -!- SIMILARITY: Belongs to the CDC6/cdc18 family.
CC {ECO:0000256|ARBA:ARBA00006184}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OZF90427.1}.
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DR EMBL; NIPN01000313; OZF90427.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A260ZXV4; -.
DR STRING; 1503980.A0A260ZXV4; -.
DR Proteomes; UP000216463; Unassembled WGS sequence.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd21146; Nip7_N_euk; 1.
DR CDD; cd21151; PUA_Nip7-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.10.450.220; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.30.130.10; PUA domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR040598; NIP7_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002478; PUA.
DR InterPro; IPR015947; PUA-like_sf.
DR InterPro; IPR036974; PUA_sf.
DR InterPro; IPR005155; UPF0113_PUA.
DR PANTHER; PTHR10763:SF26; CELL DIVISION CONTROL PROTEIN 6 HOMOLOG; 1.
DR PANTHER; PTHR10763; CELL DIVISION CONTROL PROTEIN 6-RELATED; 1.
DR Pfam; PF13401; AAA_22; 1.
DR Pfam; PF03657; UPF0113; 1.
DR Pfam; PF17833; UPF0113_N; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00359; PUA; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF88802; Pre-PUA domain; 1.
DR SUPFAM; SSF88697; PUA domain-like; 1.
DR PROSITE; PS50890; PUA; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000216463}.
FT DOMAIN 154..295
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 571..646
FT /note="PUA"
FT /evidence="ECO:0000259|SMART:SM00359"
FT REGION 1..134
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 38..68
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 69..90
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:OZF90427.1"
SQ SEQUENCE 656 AA; 72428 MW; 8A383AD36D07B13D CRC64;
MSSTPRSSRR NQKVKSVGEP AESRPLENNE TGRRRSSRIS TKVVPTVNKK PSSKSTIRRP
QEVFKTTNSE FSDSDDDMPA PKKKSEKTKE LLMSPTTVLA EQVGTLEEGD SESDSETEKP
ASPSSAQGNG ALSGREDEFN TLKSWILESK SEKTSLSMYV SGQPGTGKTA TTMRVLSALG
KAVRSCIINC ASTSTKTALF KTIFESLGLD GKPSVENFEE HVKHFTVPLV LVLDEIDHLA
NRKNAALYAA FQWPDTLSHK IIILGIANSI DLTERLLPKL MLTKTPKRLV FEPYTKDDIV
KILNDKMKKE KAVIDAKSIE LTARKVAAMS GDLRTALHIF KQQKSRLITM DEESGPPGTP
VNGCRDVLGI INNVYSSPLS RAKLPLQPRI LLAVSLALSS SKKSVFDRNS LYRAYYKACT
ALRMPPLEDD DLHSAFQTLE SQSFIRLLNG GKLVLQVDAP TAKSAISDNA LLDQIGMRPL
TEEETSLVFA KLASFIGDNV SMLIDRNDGD YCFRNHKERV YYCSENLMRQ AACISREPLL
SFGTCLGKFT KSKKFHLQIT ALDYLAPYAK FKVWLKPNAE QQFLYGNNIL KSGIARMTDG
TPTHAGIVVY SMTDVPLGFG VSAKGTADSK RADPTALVVL HQCDLGEYLR NESHLN
//